Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0513 ATGAGTAACGAAAAGGCTCCTTCATCAGCTTCTTCGAGTAGCTACGAGTTGAGCAAAGGCATCAATGGCCTCGACAAGGTTATTCTTCGCGACGCACGTGGTAGCTCCGCTGAGGTGTACTTGTACGGTGCTCACGTGACTTCATGGAAGAATGACCATGCCGAGGAATTGCTTTTTCTCAGTAGTAAGGCTATCTTTAAGCCTCCAAAGCCAATTCGTGGAGGGATCCCAATATGTTTTCCTCAATTTTCAAACCTCGGTCCTCTCGACTCACATGGATTTGCTAGAAACCAATTCTGGACAATTGATGATTCCCCTCCTCCTTTTCCAACAAGTACTTCGAATAAAGCCTTTGTTGATTTGATTCTTAAACCCTCAGAAGACGACATCAAGATTTGGCCTCACAGTTTTGAATTTCGTCTTAGGGTAGCTCTTGGACCTGGAGGAGATCTGTTGATGACATCTCGGATCAGGAACACTAACATTGATGGGAAGCCATTTTCATTCACATTTGCTTATCATACATATTTCTCTGTGTCAGATATAAGTGAAGTGCGGGTTGAAGGATTAGAGACATTGGATTATCTTGACAACTTGCAGAAAAGGGAACGCTTTACTGAACAGGGGGATGCTTTAACATTTGAATCAGAATTTGACAGGATATATCTCAGCACTCCTACAAAGATTGCAATTCTTGATCATGAGAAAAAGAGAACAATTGTATTGCGTAAAGATGGTCTTCCTGATGCTGTGGTGTGGAATCCTTGGGATAAGAAAGCAAAGGCTATATCTGATTTCGGTGATGATGAGTATAAGTACATGCTTTGTGTAGAGGCTGCTGCTATTGAAAAGCCTATCACTTTGAAACCTGGTGAGGAATGGAAGGGAAGACTAGAACTTTCAACTGTTTCTTCTAGTTATTGTAGTGGACAGCTTGATCCCAAAAGAGTTATTCAAGGAAGCTGA 966 0.4193 MSNEKAPSSASSSSYELSKGINGLDKVILRDARGSSAEVYLYGAHVTSWKNDHAEELLFLSSKAIFKPPKPIRGGIPICFPQFSNLGPLDSHGFARNQFWTIDDSPPPFPTSTSNKAFVDLILKPSEDDIKIWPHSFEFRLRVALGPGGDLLMTSRIRNTNIDGKPFSFTFAYHTYFSVSDISEVRVEGLETLDYLDNLQKRERFTEQGDALTFESEFDRIYLSTPTKIAILDHEKKRTIVLRKDGLPDAVVWNPWDKKAKAISDFGDDEYKYMLCVEAAAIEKPITLKPGEEWKGRLELSTVSSSYCSGQLDPKRVIQGS* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0513 321 Pfam Aldose 1-epimerase 26 300 IPR008183 GO:0005975|GO:0016853
Gso17g0513 321 Gene3D - 22 308 IPR014718 GO:0030246
Gso17g0513 321 PIRSF PHexose_mutarotase 7 308 IPR025532 -
Gso17g0513 321 PANTHER GLUCOSE-6-PHOSPHATE 1-EPIMERASE 11 316 - -
Gso17g0513 321 CDD D-hex-6-P-epi_like 27 301 IPR025532 -
Gso17g0513 321 SUPERFAMILY Galactose mutarotase-like 21 300 IPR011013 GO:0003824|GO:0005975|GO:0030246
Gso17g0513 321 PANTHER APOSPORY-ASSOCIATED PROTEIN C-RELATED 11 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0513 Gso-Chr17 4681637 4688576 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0513 K01792 - gmx:100801977 635.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0513 17 4681637 4688576 Gso17g0513 17 4681637 4688576 ECH
Gso17g0513 17 4681637 4688576 Gso15g1343 15 14088731 14095748 PCT
Gso17g0513 17 4681637 4688576 Gso9g0484 9 5097222 5103761 PCT
Gso15g1343 15 14088731 14095748 Gso17g0513 17 4681637 4688576 PCT
Gso9g0484 9 5097222 5103761 Gso17g0513 17 4681637 4688576 PCT