Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0504 ATGGGGGCTTGTTTTTCATGTAACTCATCCTCCACATTGAAGAATATCCGTGTGGTTCATCTCAATGGTTATGTAGAGGATTTTGATCAACCAATTTCAGTGAGGCAAGTAATTGGATACCCCAAAAAACACTTTGTTTGCACTTCCACTCAGCTTCTTTCCCCATGCTCAACATCAATGAATGGAGACACCAACCTCCAACCTGGTCAAGTGTATTTCATGCTACCATACTCGGTACTACAAGCCGATGTTTCGCCGGTGGACCTGGCTGGCCTTGCAAAGAGACTCACCACAATAGCCAAATCAGGTCCTTTGTCAAGCCAAACCCAAACATTTTGGAATTCACCCTCCAGGAGTCCTGGTGGAGTTGGGGTGGCAGAGAAATATGGTGTTGGTTTGATGAATATTGGAGGAAGAAGCCCTAGTAAAGTGCAACCTTGGAAACCTATCTTGGACACCATAACAGAGAAGCCATTCCATAAGAGAAGTGAATCGGATTTGCAAGAAAGTTAA 513 0.4425 MGACFSCNSSSTLKNIRVVHLNGYVEDFDQPISVRQVIGYPKKHFVCTSTQLLSPCSTSMNGDTNLQPGQVYFMLPYSVLQADVSPVDLAGLAKRLTTIAKSGPLSSQTQTFWNSPSRSPGGVGVAEKYGVGLMNIGGRSPSKVQPWKPILDTITEKPFHKRSESDLQES* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0504 170 PANTHER DUF4228 DOMAIN PROTEIN-RELATED 1 167 - -
Gso17g0504 170 PANTHER OS06G0700300 PROTEIN 1 167 - -
Gso17g0504 170 Pfam PADRE domain 1 156 IPR025322 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0504 Gso-Chr17 4576379 4577251 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0504 - - gmx:100775396 347.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0504 17 4576379 4577251 Gso17g0504 17 4576379 4577251 ECH
Gso13g0718 13 21466940 21467804 Gso17g0504 17 4576379 4577251 GST
Gso17g0504 17 4576379 4577251 Gso15g1354 15 14331973 14333125 PCT
Gso17g0504 17 4576379 4577251 Gso9g0496 9 5320221 5321263 PCT
Gso15g1354 15 14331973 14333125 Gso17g0504 17 4576379 4577251 PCT
Gso9g0496 9 5320221 5321263 Gso17g0504 17 4576379 4577251 PCT