Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0481 ATGTTCAATTTCTTACTAAGGAAAGACGTTCGAAAGATTCTCAAGCGCAAAGATAGCGATGCTGGAGAAAAAGGAAGAGCACTGGAAGACTTGAGAGGTTCTCTGTTTAATGAATTTCGTTCCTCTGAAGGTGCAAAACGTCAACAACAGCGTACATGTGGTCCAGCTGCAGCACTTTCCTTCAATTTTTTTATTGCAATTAGTATTATCTTCATAAACAAAATGGTTCTTCAAACTGTTAAATTCAAATTCCCCATACTTCTCTCACTAATTCACTATATAGTGAGCTGGCTCTTAATGGCTGTACTAAATGCATTTTCTTTACTTCCTGCATCTCCCTCAAAATCAACTAAGCTATCTGCTTTATTTACTCTTGGATTTGTTATGTCTCTATCTACTGGCCTTGCTAATGTCAGCTTGAAGTATAATAGCATTGGCTTCTATCAGATGGCAAAGATTGCAGTAACACCTTCAATAGTTATGGCAGAATTTGTATTGTACAAGAAGAAAGTTTCTTGGCCCAAGGCTTTAGCATTAACAGTGGTATCTATTGGTGTTGCTGTGGCTACAGTGACGGATTTGCAGTTCCATTTCTTTGGTGCCTGTGTAGCATTAGCATGGATTGTACCTAGTGCTGTAAACAAAATCCTCTGGTCCAGACTGCAGCAGCAAGAGAACTGGACAGCTTTGGCGTTGATGTGGAAAACAACACCTATTACTTTAATTTTTCTGGCTGCTATGTTACCCTGCTTAGACCCTCCTGGTGTACTTTCCTTTGATTGGAACTTCATTAACACATTGGTGATACTCACATCAGCCATTCTTGGATTTTTGCTTCAGTGGTCTGGTGCTTTAGCACTAGGTGCTACATCTGCCGTCTCACATGTTGTTCTTGGGCAGTTTAAGACATGCATTATCCTCCTGGGAAACTATTATCTCTTTGGATCCAATCCAGGCATAATCAGTATCTGTGGGGCATTTACAGCTATTGCTGGTATGTCCGTTTACACTTACCTTAATCTGAAGCAGCAATCAAACAAGATATTTCCTCGACAGGCCACCCTTTTACCAAAATCTAAACTAAGCAAAGAAAATGGAACTTCCCAAAATGGACACTACAGTGCTGAAAATGTCTAA 1137 0.3984 MFNFLLRKDVRKILKRKDSDAGEKGRALEDLRGSLFNEFRSSEGAKRQQQRTCGPAAALSFNFFIAISIIFINKMVLQTVKFKFPILLSLIHYIVSWLLMAVLNAFSLLPASPSKSTKLSALFTLGFVMSLSTGLANVSLKYNSIGFYQMAKIAVTPSIVMAEFVLYKKKVSWPKALALTVVSIGVAVATVTDLQFHFFGACVALAWIVPSAVNKILWSRLQQQENWTALALMWKTTPITLIFLAAMLPCLDPPGVLSFDWNFINTLVILTSAILGFLLQWSGALALGATSAVSHVVLGQFKTCIILLGNYYLFGSNPGIISICGAFTAIAGMSVYTYLNLKQQSNKIFPRQATLLPKSKLSKENGTSQNGHYSAENV* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0481 378 Pfam Triose-phosphate Transporter family 62 336 IPR004853 -
Gso17g0481 378 PANTHER SOLUTE CARRIER FAMILY 35 15 355 - -
Gso17g0481 378 PANTHER NUCLEOTIDE-SUGAR TRANSPORTER FAMILY PROTEIN 15 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0481 Gso-Chr17 4353293 4358170 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0481 67 362 Organic Solute Cotransporters AT1G77610 25.325 2.68e-24 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0481 - - gmx:100777883 725.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0481 17 4353293 4358170 Gso17g0481 17 4353293 4358170 ECH
Gso13g0736 13 21651727 21653535 Gso17g0481 17 4353293 4358170 GST
Gso17g0481 17 4353293 4358170 Gso15g1380 15 14929202 14939479 PCT
Gso17g0481 17 4353293 4358170 Gso9g0522 9 5763486 5768535 PCT
Gso15g1380 15 14929202 14939479 Gso17g0481 17 4353293 4358170 PCT
Gso9g0522 9 5763486 5768535 Gso17g0481 17 4353293 4358170 PCT