Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0447 ATGGCGATTTCCGATGAGCCTGAAAGTGTAGCCACTGCTCTCAACCACTCTTCCCTGCGCCGCCGTCCCTCCGCCACCTCCACCGCCGGCCTCTTCAATTCGCCTGAGACAACCACCGACAGTTCCGGTGATGACTTGGCCAAGGATTCTGGTTCCGACGACTCCATCAACAGCGACGCCGCCGCCGTCAATTCCCAACAGCAAAACGAAAAACAAGACACTGATTTCTCCGTCCTCAAATTCGCCTACCGTCCTTCCGTCCCCGCTCACCGCAAAGTGAAGGAAAGTCCGCTCAGCTCCGACACTATTTTCCGTCAGAGTCACGCGGGCCTCTTCAACCTTTGTATAGTAGTCCTTGTTGCTGTGAATAGCCGACTCATCATTGAGAATTTAATGAAGTATGGTTGGTTGATCAAATCTGGCTTTTGGTTTAGTTCAAAGTCATTGAGAGACTGGCCCCTTTTCATGTGTTGTCTTTCTCTTTTGGTATTTCCTTTCGCTGCCTTTATAGTGGAGAAGTTGGCACAACGGAAGTGTATACCCGAACCAGTTGTTGTTGTACTTCATATAATCATTACCTCAACTTCGCTTTTCTATCCAGTTTTAGTTATTCTCAGGTGTGATTCTGCTTTTGTATCAGGTGTCACGTTAATGCTGTTTTCTTGTGTTGTATGGTTAAAATTGGTGTCTTATGCACATACAAACTATGATATGAGAGCACTTACCAAATTAGTTGAAAAGGGAGAAGCACTGCTCGATACTCTGAACATGGACTATCCTTACAACGTAAGCTTCAAGAGCTTGGCATATTTCCTGGTTGCCCCTACATTATGTTACCAGCCAAGCTATCCTCGCACACCTTATATTCGAAAGGGTTGGTTGTTTCGCCAACTTGTCAAGCTGATAATATTTACAGGAGTTATGGGATTTATAATAGAACAATATATTAATCCCATAGTACAAAATTCACAGCATCCTCTCAAGGGAAACCTTCTTTACGCCACCGAGAGAGTTCTGAAGCTTTCTGTTCCAAATTTATATGTGTGGCTCTGCATGTTCTATTGCTTTTTCCACCTTTGGTTAAATATCCTGGCAGAGCTTCTTCGATTTGGTGATCGTGAATTCTACAAGGATTGGTGGAATGCCAAAACTGTCGAAGATTATTGGAGGATGTGGAATATGCCTGTTCACAAATGGATGATCCGCCACCTATATTTTCCATGTTTAAGGCACGGTCTACCAAAGGCTGCTGCTCTTTTAATTGCCTTCCTGGTTTCTGCTTTATTCCATGAGCTGTGCATTGCTGTTCCTTGCCACATATTCAAGTTGTGGGCTTTCGGTGGAATTATGTTTCAGGTTCCTTTGGTCTTGATCACTAATTATCTGCAAAATAAATTCAGAAACTCAATGGTTGGAAATATGATTTTTTGGTTCATATTCAGTATCCTTGGTCAACCTATGTGTGTACTGCTATACTACCATGACTTGATGAATAGGAAAGGCAAACTTGACTGA 1515 0.433 MAISDEPESVATALNHSSLRRRPSATSTAGLFNSPETTTDSSGDDLAKDSGSDDSINSDAAAVNSQQQNEKQDTDFSVLKFAYRPSVPAHRKVKESPLSSDTIFRQSHAGLFNLCIVVLVAVNSRLIIENLMKYGWLIKSGFWFSSKSLRDWPLFMCCLSLLVFPFAAFIVEKLAQRKCIPEPVVVVLHIIITSTSLFYPVLVILRCDSAFVSGVTLMLFSCVVWLKLVSYAHTNYDMRALTKLVEKGEALLDTLNMDYPYNVSFKSLAYFLVAPTLCYQPSYPRTPYIRKGWLFRQLVKLIIFTGVMGFIIEQYINPIVQNSQHPLKGNLLYATERVLKLSVPNLYVWLCMFYCFFHLWLNILAELLRFGDREFYKDWWNAKTVEDYWRMWNMPVHKWMIRHLYFPCLRHGLPKAAALLIAFLVSALFHELCIAVPCHIFKLWAFGGIMFQVPLVLITNYLQNKFRNSMVGNMIFWFIFSILGQPMCVLLYYHDLMNRKGKLD* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0447 504 MobiDBLite consensus disorder prediction 10 41 - -
Gso17g0447 504 PIRSF Oat_dag 6 504 IPR027251 GO:0004144|GO:0019432
Gso17g0447 504 MobiDBLite consensus disorder prediction 1 73 - -
Gso17g0447 504 MobiDBLite consensus disorder prediction 53 73 - -
Gso17g0447 504 PIRSF Oat_ACAT_DAG_ARE 6 504 IPR014371 GO:0008374
Gso17g0447 504 PANTHER STEROL O-ACYLTRANSFERASE 12 504 IPR014371 GO:0008374
Gso17g0447 504 PANTHER DIACYLGLYCEROL O-ACYLTRANSFERASE 1C 12 504 - -
Gso17g0447 504 Pfam MBOAT, membrane-bound O-acyltransferase family 254 490 IPR004299 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0447 Gso-Chr17 4053874 4062013 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0447 81 503 Lipid Metabolism Gene Families AT2G19450 77.305 0.0 696
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0447 K11155 - gmx:732606 1032.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0447 17 4053874 4062013 Gso17g0447 17 4053874 4062013 ECH
Gso13g0766 13 21984063 21992293 Gso17g0447 17 4053874 4062013 GST
Gso17g0447 17 4053874 4062013 Gso9g0552 9 6265552 6288343 PCT
Gso9g0552 9 6265552 6288343 Gso17g0447 17 4053874 4062013 PCT