Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0401 ATGATTGCGAAGACAAACACGATTATGCCTATCATTGGCAAACTGTACTGTTCATCGTCTGAGACGGTGCTTGTGGTGAGGAGGAGGCCACACGTGGTGAATGGTGGGGGTTTTGTAGTCATGGATTGTAGTGCCCAGAGGGTTGTGTTCAGGGTCGATGGTTGTGGTGTTCGTGGCAAAAAGGGAGACTTGATTCTAAGAGAAGGAGATGGAGACGCTTTGCTTCTCATGCGTCGAATGGGAGGCATGGTTGAGGCCTTAAGCATTTACAAGAAGTGGAAATGCTACAGCTTGGACTACGAAGGATCTCGGAAGCTGGTTTTCAGCTTGAGAGAACCCAATTCTTGTTTGGTTAAGAACAATGCAATCAGAATCTTCACTAGGAACAGAGGCCGTGACTTTAAGATCAGTGGCTGTTTCCCGGATAAGTGTTGTAGCATTGTTGACTCTAAAGGCAACGAGGTAGCACAGGTGGGGATGATGAAGGAAGTGGAGGAATTGATTGAAAGCAAGGATTTGTACCATGTGGTGGTGAATCCTGGGATGGATCAAGCTTTTGTTTTCGGAGTCATCGCTGTCCTTGATTACATTTATGGCGAATCTACCCACCGCTAA 615 0.4667 MIAKTNTIMPIIGKLYCSSSETVLVVRRRPHVVNGGGFVVMDCSAQRVVFRVDGCGVRGKKGDLILREGDGDALLLMRRMGGMVEALSIYKKWKCYSLDYEGSRKLVFSLREPNSCLVKNNAIRIFTRNRGRDFKISGCFPDKCCSIVDSKGNEVAQVGMMKEVEELIESKDLYHVVVNPGMDQAFVFGVIAVLDYIYGESTHR* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0401 204 SUPERFAMILY Tubby C-terminal domain-like 9 198 IPR025659 -
Gso17g0401 204 Gene3D - 10 202 IPR038595 -
Gso17g0401 204 PANTHER PROTEIN LURP-ONE-RELATED 6 9 203 - -
Gso17g0401 204 Pfam LURP-one-related 12 193 IPR007612 -
Gso17g0401 204 PANTHER - 9 203 IPR007612 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0401 Gso-Chr17 3677763 3679458 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0401 - - gmx:100306504 414.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0401 17 3677763 3679458 Gso17g0401 17 3677763 3679458 ECH
Gso13g0809 13 22412144 22413792 Gso17g0401 17 3677763 3679458 GST
Gso17g0401 17 3677763 3679458 Gso15g1474 15 17057353 17060466 PCT
Gso17g0401 17 3677763 3679458 Gso9g0591 9 7039646 7041175 PCT
Gso15g1474 15 17057353 17060466 Gso17g0401 17 3677763 3679458 PCT
Gso9g0591 9 7039646 7041175 Gso17g0401 17 3677763 3679458 PCT