Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0398 ATGGCCCAGGATTTCTCCAAAGCTGTTGATGACGGCCTCAAGCTCTCCAAACGCATATACTTCGGGAAGGACAGGGCGGTGGCACCTCCTAAACCTCCGCCGCCGATGACGCGCTCCGCCACCGCGTTTCTCCCCTCGGCGCCGATGGTCTACGCGGTGATCTCCGATCCAGGGATCGTGGACAACCCCGACATCCCGAGCTACCAACCGCACGTGTACGGAAGGTGTGATCCTCCAGCGTTGATTCCGCTTCAGATGAACGCTATTCAGATGGAAGCTGATTGCTACCACGAAACCGCGTTTATCACAGTCTCCGGCACTTGGAGACTCCACTGCGTCATGGGAAGCCGCTCCTGCGATTGCCGCATCGCTGTTCCCGTCAGCCACCAGGGTTCAATTCTAGGTGTTGAGGTCAGCGTTTCTAGAAAATCATATTCTACTCAACTGGTTGTAATGGAAGATGACAATGGGAACCAAAACGCCTCGCCACCTCAAAACGGAGGGTTTCTCATCCCGGATATATTTACTTTAACTATACCGCAGATTGATGGAGGTTCCAATTTGTCGATCAAAGTTCGGTGGTCTCAGAAAATAGTGTTCTCCAAAGGCCAGTTCTCTTTGAATGTGCCGTTTACCTTTCCTGATTTCGTTAACCCTGCGGGGAAGAAAATATCTAAAAGAGAAAAGATACAAATTAATGTGGATGCTGTTACTGGAGGTGAGCTTCTGTGCAAGACATTAAGCCACCCACTGAAGGAAGTGAGGCGTCATGTTGGGAGCATGGGCTTCTTATATGATTCCGATGTTCTTTCATGGTCTAAAGTTGATTTTAGCTTTTCATATGCTGTTTCTTCAAGTCATATAACTGGTGGTGTTCTTTTGGAATCTGCATCTGTGCATGATTTTGATCAAAGAGAGATGTTCTACATGTATCTTTCTACAGGAGATATTCAGAGTGACAAGGTATTCAAAAAGGACATAATATTCATTATTGACATCAGCGGTAGTATGCGGGGAAAGCTAATTGAAGACACAAAGAATGCACTATTGACTGCTCTCTCTAAGCTTAATCAGGCTGATTCATTTAATATTATAGCCTTTAATGGAGAGACTTATCTATTTTCCAAAACGATGGAATTGGCTTCCGGGGATGCTGTTGAAAGGGCCACTGAGTGGATTAACACGAACTTTGTTGCTGGGGGTGGTACAAATATTTCTCATCCATTAAACACGGCAATAGAGATGCTATCCAATATTCAAAGTTCAGTTCCAATAATTTTCCTAGTTACAGATGGAACTGTTGAAGATGAAAGACAAATTTGTGCTATGGTAAAGAATCGTATGATCAATGGAGAGTCAATATGCCCTCGAATTTACACTTTTGGCATTGGTTCGTTCTGCAATCATTATTTCTTGCGAATGCTCGCAATGATTGGTAGGGGCCAATATGATGCTGCGTTGGATGTAGATTTGATTGAACCTCGAATGCTGACATTGTTTGGCAAAGCTTCATCTCTCATTCTTGCAAATATCAAAATGGACACATTGGATGATCTTGATGACCTCGAGGTATACCCTCCTCATATTCCAGATCTTTCATCAGAGGGTCCATTGATTTTATCTGGGAGATACAGGGGAAATTTTCCCAAAACTCTTAAAATCGAAGGTATCTTGGCTGATTTCAGTAATTTTGTAGTAGATATGAAGATACAAAATGCTAAGGACATTCCTGTGCAAAAGATTTCTGCAAGAGATCAAATAGAGCATCTTACTGCCCAAGCATGGCTCATGGAAAATAAACAACTAGAACAGAAGGTTGCAAAATTGAGCTTGCAGACTGGCTTTATGTCTGAGTATACACGAATGATAATACTTGAGACTGATCATCTAAAGAAAGTCAAGGAATCAGCCGGAACGAAAGAAGCGTCAAAAAAGAGCCATCCTCAGTATGAGGCACCCGTCCAAGGCCAGAGAATGATTTTACTACCCCATTTGGGTATTGGCTTTGGCAACTTAACTGCAACTGCTGAAAATACTCCTCCAGGATTTGAATCAAAATTTCCTGAAGTGCCGGAAATCTTTAAGGCGGCCACAAATTGTTGTGAAACCTTGTGCAGTTACTGTTGTTGCATGTGCTGCATCCAGTGTTGTACCCGGATAAACAACCAATGTGCAACTGCATTGACACAACTCTGCATTGGTCTAGGATGCTTCGGCTGCATCACATGTTGTTCAGATATATGCTGTTCTGGAAACGAAGGCTGA 2265 0.4353 MAQDFSKAVDDGLKLSKRIYFGKDRAVAPPKPPPPMTRSATAFLPSAPMVYAVISDPGIVDNPDIPSYQPHVYGRCDPPALIPLQMNAIQMEADCYHETAFITVSGTWRLHCVMGSRSCDCRIAVPVSHQGSILGVEVSVSRKSYSTQLVVMEDDNGNQNASPPQNGGFLIPDIFTLTIPQIDGGSNLSIKVRWSQKIVFSKGQFSLNVPFTFPDFVNPAGKKISKREKIQINVDAVTGGELLCKTLSHPLKEVRRHVGSMGFLYDSDVLSWSKVDFSFSYAVSSSHITGGVLLESASVHDFDQREMFYMYLSTGDIQSDKVFKKDIIFIIDISGSMRGKLIEDTKNALLTALSKLNQADSFNIIAFNGETYLFSKTMELASGDAVERATEWINTNFVAGGGTNISHPLNTAIEMLSNIQSSVPIIFLVTDGTVEDERQICAMVKNRMINGESICPRIYTFGIGSFCNHYFLRMLAMIGRGQYDAALDVDLIEPRMLTLFGKASSLILANIKMDTLDDLDDLEVYPPHIPDLSSEGPLILSGRYRGNFPKTLKIEGILADFSNFVVDMKIQNAKDIPVQKISARDQIEHLTAQAWLMENKQLEQKVAKLSLQTGFMSEYTRMIILETDHLKKVKESAGTKEASKKSHPQYEAPVQGQRMILLPHLGIGFGNLTATAENTPPGFESKFPEVPEIFKAATNCCETLCSYCCCMCCIQCCTRINNQCATALTQLCIGLGCFGCITCCSDICCSGNEG* 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0398 754 Pfam von Willebrand factor type A domain 325 483 IPR002035 -
Gso17g0398 754 Coils Coil 592 612 - -
Gso17g0398 754 Gene3D von Willebrand factor, type A domain 325 500 IPR036465 -
Gso17g0398 754 ProSiteProfiles VWFA domain profile. 326 519 IPR002035 -
Gso17g0398 754 SUPERFAMILY vWA-like 325 488 IPR036465 -
Gso17g0398 754 SMART VWA_4 324 504 IPR002035 -
Gso17g0398 754 PANTHER INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN-LIKE PROTEIN 1 753 - -
Gso17g0398 754 PANTHER INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN-LIKE PROTEIN 1 753 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0398 Gso-Chr17 3646446 3652121 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0398 - - gmx:100777542 1464.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0398 17 3646446 3652121 Gso17g0398 17 3646446 3652121 ECH
Gso13g0813 13 22447536 22453029 Gso17g0398 17 3646446 3652121 GST
Gso17g0398 17 3646446 3652121 Gso9g0597 9 7115246 7121639 PCT
Gso9g0597 9 7115246 7121639 Gso17g0398 17 3646446 3652121 PCT