Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0309 ATGACTAGTGGTAGTTGTATTGGAATCTCTACCATGAAGCCTTGTTGTAGAATCCTATGTAACTATAAAAGTCCATCTATTTTTGGGTTTTCTCCAACCAAGTTCAGTCATTCAGCAATCATGGGCATGTTGTCCAGATCAGGTTATCACAACTCAACCCATTGCCATAGGTACAATACCTGTAATAATACTCAGATTGTAGGGTACATAAATGTGATCCATCCGAATTGGAGAGATTTTAGTGTTTCCGGTTCGAATTGGGGTCTTGCTAAGAATTTTAGCACTAGTGTTTGTGTCAATATTGGTAGTTTTAGGCCTAGGGTCGTGTCCTTGACACCGCATGTAGCGTCGGATTTTAGGAATCACTCTACATCGGTTGATTCTCATTCTAATGACACGAGCTTTGAGAAGATTTACATTCAAAGTGGCTTGAATGTCAAGCCATTGATAATTGAAAGAATTGAGACTGATCAAAGTAAATTGGAGGAAGTTGCTGAAGAAAGATGTAATGAGTCAAACGTAAATATAGATAATTTGAAGGATTTGAGTGAGAATAAGGTTCAGAGGGAGGTGTCTGAGATTGAAAAGGAAGCTTGGAAGTTGCTTCAGGATGCTGTCGTCACTTACTGTGGGAATCCGGTTGGGACTGTTGCAGCTAATGATCCTGCGGACAAACAGCCGCTGAATTATGATCAAGTCTTTATCCGTGATTTTGTTCCATCAGCTCTTGCCTTCTTGCTTAATGGTGAAGGGGAAATTGTCAAGAATTTTTTACTTCACACATTGCAATTACAGAGTTGGGAGAAGACTGTTGACTGCTACAGTCCAGGGCAAGGGTTGATGCCAGCAAGCTTCAAGGTTAGAACTGTGCCTCTTGACGGTAGCAATGAAGCATTTGAGGAAGTTTTGGATCCTGATTTTGGGGAATCAGCTATTGGTCGTGTTGCGCCTGTTGATTCAGGATTGTGGTGGATTATATTGTTGAGAGCTTATGGGAAATTAACGGGTGACTATGCTTTGCAAGAGAGAGTGGATGTCCAAACAGGCATAAGACTTATCCTTAAGTTGTGTCTGACTGATGGATTTGACATGTTTCCTTCTCTTTTAGTCACTGACGGTTCCTGCATGATTGATAGAAGGATGGGCATTCACGGTCACCCTCTTGAGATCCAGGCATTATTTTACTCGGCTTTACGCTGCTCTCGTGAGATGCTAATAGTCAATGATGCAACCAAGAGTCTGGTGGCTGCTGTTAGTAATCGCCTGAGTGCACTCTGCTTTCACATGAGAGAGTATTATTGGGTTGATATGAAGAAGATTAATGAAATTTACCGGTACAAGACAGAAGAGTATTCTACTGATGCTGTAAACAAGTTTAACATCTATCCAGAGCAAATTCCTTCATGGCTAGTAGACTGGATTTCCGAGGAAGGTGGCTACTTCATTGGCAATTTGCAACCTGCTCATATGGACTTCAGGTTTTTCTCACTCGGAAACCTTTGGGCCATTGTTTCATCTTTAGGCACAACAAGACAGAATCAGGGCATTTTGAATTTAATTGAGGCCAAATGGGATGATATTGTTGGTCAAATGCCTCTCAAGATTTGTTATCCAGCGCTAGAGGGTGAGGAATGGCGTATAACCACTGGCTGTGACCCGAAGAACACCCCTTGGTCATATCATAATGGAGGATCTTGGCCGACACTTCTCTGGCAGTTCACATTAGCCTGCATCAAGATGGGAAGGCCTGATTTGGCACAAAAAGCAGTCGATTCAGCAGAGAAAAGGCTTTCAGCGGATAGATGGCCCGAATATTACGATACCCCAAATGGAAGGTTTATCGGGAAGCAATCGCGGATGGTGCAGACATGGACCATTGCTGGTTTCTTGACCTCAAAGATGCTTCTAGAGAACCCAGAAAGGGCATCCTTGTTGTTTTGGGAGGAGGATTTTGAACTTCTTCAGAACTGTGTCTGCATGCTAAGCAAAAGTGGCAGAAGGAAGTGTTCCCGTTTTGCTGCAAGGTCTCAGTTTATTGTTTAA 2043 0.4258 MTSGSCIGISTMKPCCRILCNYKSPSIFGFSPTKFSHSAIMGMLSRSGYHNSTHCHRYNTCNNTQIVGYINVIHPNWRDFSVSGSNWGLAKNFSTSVCVNIGSFRPRVVSLTPHVASDFRNHSTSVDSHSNDTSFEKIYIQSGLNVKPLIIERIETDQSKLEEVAEERCNESNVNIDNLKDLSENKVQREVSEIEKEAWKLLQDAVVTYCGNPVGTVAANDPADKQPLNYDQVFIRDFVPSALAFLLNGEGEIVKNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRTVPLDGSNEAFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKLTGDYALQERVDVQTGIRLILKLCLTDGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYSALRCSREMLIVNDATKSLVAAVSNRLSALCFHMREYYWVDMKKINEIYRYKTEEYSTDAVNKFNIYPEQIPSWLVDWISEEGGYFIGNLQPAHMDFRFFSLGNLWAIVSSLGTTRQNQGILNLIEAKWDDIVGQMPLKICYPALEGEEWRITTGCDPKNTPWSYHNGGSWPTLLWQFTLACIKMGRPDLAQKAVDSAEKRLSADRWPEYYDTPNGRFIGKQSRMVQTWTIAGFLTSKMLLENPERASLLFWEEDFELLQNCVCMLSKSGRRKCSRFAARSQFIV* 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0309 680 Pfam Alkaline and neutral invertase 198 639 IPR024746 GO:0033926
Gso17g0309 680 PANTHER ALKALINE/NEUTRAL INVERTASE C, MITOCHONDRIAL 5 679 - -
Gso17g0309 680 SUPERFAMILY Six-hairpin glycosidases 198 631 IPR008928 GO:0005975
Gso17g0309 680 Coils Coil 162 182 - -
Gso17g0309 680 Gene3D - 228 630 IPR012341 GO:0005975
Gso17g0309 680 PANTHER - 5 679 IPR024746 GO:0033926
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0309 Gso-Chr17 2736430 2741706 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0309 - - gmx:100783794 1405.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0309 17 2736430 2741706 Gso17g0309 17 2736430 2741706 ECH
Gso7g1994 7 43995983 44001155 Gso17g0309 17 2736430 2741706 GST