Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0306 ATGACGGTGGTCGGACTCTTCCTCACTGCCACGAAGCTCGCCGGAGCTCTATTCACTCTCACCGTCGCCGCCAACGCCTTCTCCTACTCCCGCTTTCGCAAGAAGAACCTTCGCGGTTTCCGCTCTCCCATCGATGAATCCCAAGACACTCTCGCACACTTTAACGTCGCTGAAGGGGAAGATGGGTTTTTCTTTGGTTTGGCGACAGCGCCAGCACATGTTGAGGACAGGCTTGATGATGCTTGGATCCAGTTTGCTGAGAAAAAGAGTGGTGAAGGTGGTGGTGACTCTGAGGGGAAGCAGAGAGTGGATGCTGTGATTGGTTCTGCTTCTGGCGATGGTGGTTCCCAGCCGGCCATAACATCTCCGAGGAGCAGGAAGCCTCTCAAGGTGGCGATGGAGGCCATGATCAGGGGAATTGAGAAGTATATGGAAGTGGAAGGGAAAGAAAGAGAAGAAGAAGCCCGTCCTAATGTAACTGCTTGGCATAATGTTCCATGCCCGGAGGAGAGGTTAAGGTTTTGGTCTGATCCTGAAACAGAAATAAAGTTGGCCAAGGATACTGGTGTTACAGTTTTTCGCATGGGAATAGATTGGACAAGAATCATGCCAGTGGAGCCAGTAAGCAGCCTTAATCAATCTGTTAACTATGCTGCATTGGAACGGTATAAGTGGATTATCAATAGGGTTCGATCGTATGGAATGAAAGTGATGCTCACTCTTTTTCATCACTCGCTTCCACCCTGGGCTGGTGAGTATGGAGGTTGGAAGCTGGAAAAGACAGTGGATTATTTCATGGACTTTACCAGGCTTGTTGTAGACAGTGTCTCAGATTTGGTAGACTACTGGGTAACATTTAATGAGCCCCATGTCTTCTGTATGCTTACTTATTGTGCTGGAGCTTGGCCTGGTGGTCATCCTGATATGCTTGAGGCTGCTACTTCTGCACTTCCAACTGGTGTTTTCCAGCAGGCCATGCACTGGATGTCTATTGCACACTCAAAGGCATACGACTACATCCATGGACTAAGTAACCCATTAAATTCAATAGTCGGTGTAGCACACCATGTGTCATTTATGCGACCCTATGGTTTGTTTGATATTGCTGCTGTTTCACTGGCTAATTCATTGACTCTCTTCCCATACATTGATGAAATATCTGAGAAGCTGGACTATATAGGCATAAACTACTATGGGCAGGAAGTGGTTTCAGGTGCAGGCCTGAAGCTGGTGGAAAATGATGAGTACAGTGAATCTGGTCGTGGGGTATACCCTGATGGCTTATACCGCATGCTGCTTCAATACCATGAAAGATACAAACATCTAAATATTCCCTTCATCATTACTGAAAATGGGGTTTCAGATGAGACAGATTTGATTCGCCGGCCATATCTCTTGGAGCATTTGCTTGCTATTTATGCTGCCATGATCATGGGTGTGCGTGTACTTGGTTACCTGTTCTGGACTATTTCTGATAACTGGGAGTGGGCTGATGGATATGGTCCCAAGTTTGGACTTGTTGCGGTTGACCGGGCAAATAATCTTGCACGGACCCCTCGCCCCTCTTACCATCTATTTTCTAAGATTGTGAATACAGGCAAAGTTACACATGAAGATCGTGAAAGAGCATGGGATGAACTTCAAAGAGTTGCAAAAGAGAAGAAAACAAGACCATTTTATCGGGCTGTGGATAAACACCGTTTAATGTATGCAGGTGGACTTGACAAACCTGAACAGCGACCTTATATAGAACGAGATTGGCGGTTTGGTCATTATCAGATGGATGGACTCCAGGATCCCTTGAGCCGCTTCTCAAGATCCATTTTTCGACCATTCTCCCTCTTCTCCCTTAAAAGGAAACCAAAATCTCAAAAGAAGAATGCCAAATTGATTCTCCAGCCTCTTGAAACTTAG 1914 0.4624 MTVVGLFLTATKLAGALFTLTVAANAFSYSRFRKKNLRGFRSPIDESQDTLAHFNVAEGEDGFFFGLATAPAHVEDRLDDAWIQFAEKKSGEGGGDSEGKQRVDAVIGSASGDGGSQPAITSPRSRKPLKVAMEAMIRGIEKYMEVEGKEREEEARPNVTAWHNVPCPEERLRFWSDPETEIKLAKDTGVTVFRMGIDWTRIMPVEPVSSLNQSVNYAALERYKWIINRVRSYGMKVMLTLFHHSLPPWAGEYGGWKLEKTVDYFMDFTRLVVDSVSDLVDYWVTFNEPHVFCMLTYCAGAWPGGHPDMLEAATSALPTGVFQQAMHWMSIAHSKAYDYIHGLSNPLNSIVGVAHHVSFMRPYGLFDIAAVSLANSLTLFPYIDEISEKLDYIGINYYGQEVVSGAGLKLVENDEYSESGRGVYPDGLYRMLLQYHERYKHLNIPFIITENGVSDETDLIRRPYLLEHLLAIYAAMIMGVRVLGYLFWTISDNWEWADGYGPKFGLVAVDRANNLARTPRPSYHLFSKIVNTGKVTHEDRERAWDELQRVAKEKKTRPFYRAVDKHRLMYAGGLDKPEQRPYIERDWRFGHYQMDGLQDPLSRFSRSIFRPFSLFSLKRKPKSQKKNAKLILQPLET* 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0306 637 MobiDBLite consensus disorder prediction 107 126 - -
Gso17g0306 637 PRINTS Glycosyl hydrolase family 1 signature 389 403 IPR001360 GO:0004553|GO:0005975
Gso17g0306 637 PRINTS Glycosyl hydrolase family 1 signature 446 454 IPR001360 GO:0004553|GO:0005975
Gso17g0306 637 PRINTS Glycosyl hydrolase family 1 signature 458 469 IPR001360 GO:0004553|GO:0005975
Gso17g0306 637 PRINTS Glycosyl hydrolase family 1 signature 479 496 IPR001360 GO:0004553|GO:0005975
Gso17g0306 637 PRINTS Glycosyl hydrolase family 1 signature 503 515 IPR001360 GO:0004553|GO:0005975
Gso17g0306 637 ProSitePatterns Glycosyl hydrolases family 1 active site. 446 454 IPR018120 -
Gso17g0306 637 PANTHER GLYCOSYL HYDROLASE 3 591 IPR001360 GO:0004553|GO:0005975
Gso17g0306 637 Pfam Glycosyl hydrolase family 1 384 532 IPR001360 GO:0004553|GO:0005975
Gso17g0306 637 Pfam Glycosyl hydrolase family 1 179 364 IPR001360 GO:0004553|GO:0005975
Gso17g0306 637 PANTHER GALACTOLIPID GALACTOSYLTRANSFERASE SFR2, CHLOROPLASTIC 3 591 - -
Gso17g0306 637 SUPERFAMILY (Trans)glycosidases 160 538 IPR017853 -
Gso17g0306 637 Gene3D Glycosidases 139 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0306 Gso-Chr17 2706685 2712166 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0306 6 609 Glycoside Hydrolase AT3G06510 63.876 0.0 844
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0306 K21362 - gmx:732645 1273.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0306 17 2706685 2712166 Gso17g0306 17 2706685 2712166 ECH
Gso7g1997 7 44021717 44027334 Gso17g0306 17 2706685 2712166 GST