Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0302 ATGCTTCTCCTCAGTCCTGTCACTCCCGGTCAGGTCTCGTTCCTGCTCGGGATCATTCCGGTCGTCGTGGCATGGATATATTCGGAGATGTTGGAGTACCGGAACAACTATGTCCCGTCCAGAGCTAGGCAATCGGACATCAACTTAGTTGAAATAGGAAGTGATGTTGTCAAAGACGAAGACAGAGCAGCTTTATTGGAGGGAGGAGCTTTACAGTCAGGATCTCCAAAGGCACGGAGCTTAACTGCCTCGCCATCAATTATCCGATTCCTTTTGATGGATGAGTATTTCCTTCTTGAGAACCGTTTAACACTTAGAGCGATGTCTGAATTTGGTCTCATCTTGGCTTACTTTTATTTGTGCGACCGCACAGATTTCTTTGCCTCATCCAAAAAGAGTTACAATAGGGATCTTTTCCTATTTCTCTATTTTCTCCTCATCATAGTTTCAGCAATGACTTCCTTTAAGATACATCATGACAAGTCACCATTGTCTGGGAAATCCATCCTTTACTTGAATAGACACCAGACTGAAGAATGGAAAGGCTGGATGCAGGTTTTGTTTTTGATGTATCATTACTTTGCTGCATCTGAAATCTACAATGCAATCCGTTTGTTCATTGCTGCATATGTATGGATGACTGGATTTGGGAACTTCTCATATTATTATGTTCGTAAAGATTTTAGTCTAGCAAGATTTGCTCAGATGATGTGGCGGCTTAATTTCTTTGTGGTGTTCAGTTGTATTGTACTTAACAACAGTTACATGTTATACTACATCTGCCCCATGCACACTCTTTTCACTCTTATGGTTTATGGGGCACTTGGTATTCTCCACAAGTACAATGAGATTGGGTCAGTCATTGCTGTAAAAATCATTGGTTGCTTCTTGGTTGTTATCTTAGTATGGGAGATACCTGGAGTCTTTGAATGGCTTTGGAGTCCATTTACTTTCTTTCTCGGTTATACTGACCCGAATCCTGCCAAATCACATCTTTCTCGCTTGCATGAATGGCATTTTCGTTCAGGGCTTGACCGCTACATATGGATAATTGGAATGATTTATGCTTATTATCATCCAACTGTTGAACGATGGATGGAAAAATTGGAGGAAGCAGAAATCAAGCGCAGAATATCAATCAAGGCAACTGTTGTTCTGATATGTTCATTGGTGGGTTATTTATGGTTTGAGCATATATACAAGCTGGACAAGGTCACATACAATAAATACCATCCTTATACCTCATGGATTCCCATAACGGTTTACATATGCTTGCGGAATGTTACCCAAAGTTTTCGTAGCTATACACTGACCCTTTTTGCATGGCTTGGGAAGATTACACTGGAGACTTACATCTCCCAGATCCATATCTGGTTAAGGTCAGGTATTCCAGACGGGCAACCCAAATTGTTGCTTTCCCTGATCCCAGACTACCCAATGTTGAACTTCATGCTTACTACTTCCATATATGTTGCAATTTCCTATAGGCTCTTTGACCTGACAAATACACTGAAAATGGCATTTGTACCCAGCAAAGACGACAAACGTCTTGTACACAATTTAATTACAGCAACAACAATCTCAGTTGTTTTATATTCTTTGTCCCTCGGCTTCCTTAGGGTACCTCAGATGTTGGTTTAA 1641 0.4089 MLLLSPVTPGQVSFLLGIIPVVVAWIYSEMLEYRNNYVPSRARQSDINLVEIGSDVVKDEDRAALLEGGALQSGSPKARSLTASPSIIRFLLMDEYFLLENRLTLRAMSEFGLILAYFYLCDRTDFFASSKKSYNRDLFLFLYFLLIIVSAMTSFKIHHDKSPLSGKSILYLNRHQTEEWKGWMQVLFLMYHYFAASEIYNAIRLFIAAYVWMTGFGNFSYYYVRKDFSLARFAQMMWRLNFFVVFSCIVLNNSYMLYYICPMHTLFTLMVYGALGILHKYNEIGSVIAVKIIGCFLVVILVWEIPGVFEWLWSPFTFFLGYTDPNPAKSHLSRLHEWHFRSGLDRYIWIIGMIYAYYHPTVERWMEKLEEAEIKRRISIKATVVLICSLVGYLWFEHIYKLDKVTYNKYHPYTSWIPITVYICLRNVTQSFRSYTLTLFAWLGKITLETYISQIHIWLRSGIPDGQPKLLLSLIPDYPMLNFMLTTSIYVAISYRLFDLTNTLKMAFVPSKDDKRLVHNLITATTISVVLYSLSLGFLRVPQMLV* 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0302 546 PANTHER N-ACETYLNEURAMINATE 9-O-ACETYLTRANSFERASE 7 543 - -
Gso17g0302 546 Pfam 10 TM Acyl Transferase domain found in Cas1p 104 519 IPR012419 -
Gso17g0302 546 PANTHER PROTEIN REDUCED WALL ACETYLATION 2 7 543 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0302 Gso-Chr17 2680000 2685594 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0302 K03377 - gmx:100808555 1088.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0302 17 2680000 2685594 Gso17g0302 17 2680000 2685594 ECH
Gso7g2002 7 44068376 44074457 Gso17g0302 17 2680000 2685594 GST