Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0300 ATGACAAACTTGAAGCCTCTAATTCTCTTCTTTTATCTCCTAGCCATTGTTGTTATGATTTCAATACCATCAAGCCACTGCAGCAGAACCTTGCTTCCAGAAAACGAAAAGCTGATAGAGAACACTTGCAAGAAAACTCCCAACTACAACGTTTGCCTTGAGTCTCTGAAGGCAAGCCCTGGGAGCTCCAGTGCTGACGTCACAGGGCTGGCTCAAATCATGGTCAAAGAGATGAAGGCCAAAGCAAACGATGCATTGAAAAGAATCCAAGAGTTGCAGAGGGTGGGAGCATCGGGGCCTAAGCAAAGAAGAGCCTTGAGTTCTTGTGCTGATAAATACAAAGCGGTTTTAATTGCTGATGTTCCACAAGCCACTGAGGCTCTGCAGAAAGGTGACCCCAAGTTTGCTGAAGATGGGGCTAATGATGCTGCTAATGAGGCTACTTATTGTGAGACTGATTTCTCTGCAGCAGGGAATTCCCCACTCACCAAACAGAACAATGCTATGCATGATGTTGCTGCTGTTACTGCCGCTATTGTTAGATTGTTGCTCTAA 555 0.4541 MTNLKPLILFFYLLAIVVMISIPSSHCSRTLLPENEKLIENTCKKTPNYNVCLESLKASPGSSSADVTGLAQIMVKEMKAKANDALKRIQELQRVGASGPKQRRALSSCADKYKAVLIADVPQATEALQKGDPKFAEDGANDAANEATYCETDFSAAGNSPLTKQNNAMHDVAAVTAAIVRLLL* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0300 184 Coils Coil 75 95 - -
Gso17g0300 184 PANTHER PECTINESTERASE INHIBITOR-LIKE 16 184 - -
Gso17g0300 184 SMART PMEI_2 34 179 IPR006501 GO:0004857
Gso17g0300 184 Gene3D Invertase/pectin methylesterase inhibitor family protein 34 184 IPR035513 -
Gso17g0300 184 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 36 183 IPR035513 -
Gso17g0300 184 TIGRFAM PME_inhib: pectinesterase inhibitor domain 11 183 IPR006501 GO:0004857
Gso17g0300 184 CDD CIF_like 36 183 IPR034087 GO:0004857|GO:0043086
Gso17g0300 184 Pfam Plant invertase/pectin methylesterase inhibitor 38 179 IPR006501 GO:0004857
Gso17g0300 184 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 16 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0300 Gso-Chr17 2670864 2671727 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0300 - - gmx:100500640 353.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0300 17 2670864 2671727 Gso17g0300 17 2670864 2671727 ECH