Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0299 ATGAAAATTATGGAATCATTAGCTCTTATCTTCTACAGTACTCTTGTTTTAGCTACGATTTCAGTTCCAGCAACTAACTCCAGAATCATCCATCAAAAAAACAATGCCAATCTGATTGAAGAAACTTGCAAGCAGACACCCCATCACGACCTTTGCATCCAATACCTCTCCTCCGACCCTCGCAGCACCGAAGCAGATGTGACAGGGCTGGCACTTATTATGGTCAACGTAATCAAAATCAAAGCAAACAATGCATTGGACAAAATCCACCAACTGCTTCAGAAAAACCCTGAACCTAGTCAAAAGGAACCACTGAGTTCGTGTGCTGCTAGATACAAAGCAATTGTGGAAGCTGACGTGGCACAAGCCGTTGCGTCTCTGCAGAAAGGAGACCCCAAGTTCGCAGAAGATGGTGCCAATGATGCTGCTATTGAGGCCACCACTTGTGAGAACAGCTTCTCTGCTGGGAAATCGCCACTCACCAATCACAACAATGCTATGCACGATGTTGCAACCATAACTGCAGCTATAGTTAGACAATTGCTCTAG 549 0.4481 MKIMESLALIFYSTLVLATISVPATNSRIIHQKNNANLIEETCKQTPHHDLCIQYLSSDPRSTEADVTGLALIMVNVIKIKANNALDKIHQLLQKNPEPSQKEPLSSCAARYKAIVEADVAQAVASLQKGDPKFAEDGANDAAIEATTCENSFSAGKSPLTNHNNAMHDVATITAAIVRQLL* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0299 182 PANTHER PECTINESTERASE INHIBITOR-LIKE 19 182 - -
Gso17g0299 182 TIGRFAM PME_inhib: pectinesterase inhibitor domain 4 181 IPR006501 GO:0004857
Gso17g0299 182 Pfam Plant invertase/pectin methylesterase inhibitor 37 177 IPR006501 GO:0004857
Gso17g0299 182 CDD CIF_like 36 181 IPR034087 GO:0004857|GO:0043086
Gso17g0299 182 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 36 181 IPR035513 -
Gso17g0299 182 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 19 182 - -
Gso17g0299 182 SMART PMEI_2 34 177 IPR006501 GO:0004857
Gso17g0299 182 Gene3D Invertase/pectin methylesterase inhibitor family protein 34 182 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0299 Gso-Chr17 2667769 2668722 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0299 - - gmx:100306719 356.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0299 17 2667769 2668722 Gso17g0299 17 2667769 2668722 ECH