Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0262 ATGGGAGCGCCGGAGAAATCACAGCCTAACACTAATTCGATGCAGCGTGTCAAGGTATATCGTCTGAATGATGATGGGAAATGGGATGACCAGGGTACTGGACATGTCTCTGTTGATTATTTAGAGCGATCAGAAGAGCTGGGCTTATTTGTTTATGATGAAGAGGATAATGAGAACATACTTCTGCATCGCATCAGTTCTGATGATATTTATAGGAAACAAGAAGATACAATCATCTCATGGAGAGATCCAGAATATGCTACTGAACTGGCACTTAGCTTTCAAGAGCCTAGCGGCTGCTCTTACATATGGGACAATATTTGCAATGTCCAGAGGAATATGCATTTTAATACATTAAATAGTGAGCCATTTCACAGTGTCAGCAGTGAGCCAAGGGAGTTGCCTGCTGTTGAGCTATCAACACTTCCTTTGATTCTAAAGACTGTGGTTGACAGTGGCTTTGCAGATCAGTTGCGGCTTACAGAACTAATATTAAGTGATCAAGCGTTTTTTCGGAAGCTGATGGAAGTATTCAGAATGTGTGAAGACTTGGAAAATATTGATGGCCTTCACATGATTTTCAAAATAGTCAAAGGGATTGTTTTGCTAAATAGTTCAGCGATTTTTGAGAGAATTTTTAGTGATGACTTTATAGTGGACATTATTGGTGCCCTCGAATATGATCCAGAGGTTCCTTTTGTTCAACATCATCGTAAATTCTTAAAGGAGCATGTTGTTTTTAAGGAGGCCATACCTATAAAAGATCCCGTTGTGTTGTCAAAGATACATCAGACATATAGAGTTGGTTTTTTGAAGGATGTTGTTCTGGCGAGAGTCTTGGATGAGGGTATTGGTGCAAATCTTAACTCGATAATACATTCTAACAATGCCTATGTTGTCTCTTTGTTGAAGGATGACAGTACATTTATCCAGGAGTTGTTTGCTAGGCTAAAATCGCCAACCACCTCTCAAGAATCAAAGAAGAACTTGGTTTATTTCTTACACGAGTTTTGTAGTTTGAGCAAGAGCCTGCAGATGGTCCAGCAGCTTCGGCTTTTTAGGGATCTAATGAACGAAGGCATCTTTGATGTTGTCACCAATGTTTTGCAAAGTCAAGACAAGAAGCTTGTGTTAACTGGAACAGATATCCTCATTCTTTTCTTGAATCAAGACCCTAATCTTCTGCGATCCTATTTTGTTCGACAGGAAGGATTTGCTCTTCTTGGACTTTTGGTTAAAGGAATGTTAACAGATTTTGGAGAGAACATGCACTGCCAGTTTCTTGAAATTCTTCGCAATTTATTGGACTCATGCACATTGTCTGGACCACAGAGGGACACTATTATTGACATATTCTTTGAGAGGCATTTGGGGCAATTGATTGAGGTTATAACAGCATCTTGTCCTTCAGAAAATACTGCTGATGCAAGTGGCAAATCAATAGGTCCTGGACGAAGAATTCAGTGTCAGATTGGAACAAAGCCGGAGATACTATCAAACATATGTGAATTACTATGCTTTTGTGTCCTACATCATCCATACAGAATAAAGTGCAACTTTCTTCTTAATAATGTGATTGAGAAAATATTGCTATTGATACGGAGAGCAGAAAGATACTTAGTTGTTGGTGCTGTCCGGTTCATTCGAACTATTCTCTCTCGCCATGATGAACATCTGATAAATTATTTTGTTAGGAATAATGTTCTGAAGCCAATTATTGATGCATTTGTTTCTAATGGCAATCGCTACAATCTGCTCCATTCTGCTGTTCTGGAACTTTTTGAGTTTATTCAGAAGGAGAATCTGAAATTATTGCTGAAATACATAGTCGATTCTTTTTGGGACCAGCTGATGAAATTTGAGTATTTGGCTTCAATTCACTCACTGAAAGTTAAATATGATCAGTGTTTGGATAATGGTGGGACAAAAGATGCCACTGCTGTAGAGGACATTCGAAGGCGAAATGATGAGCGTGCTCTGGAGAGAGAAGAAGAACGGTACTTTAATGAGGACAGTGATGAGGAGGATAGTGCTTCTGCATCTGTTCCACGCAATCAGAAAGGACACCAGCAACCTAATCTATCCAATGGAGTTGCTGCAAGCTATTCACAGTTAAGTCCAAGGTCACTGGTTGACTATGAGGATGATGAGGATGATGAAGATTATAAGCCACCCCCAAGGGAGCAGCCAGAAACTTCTGAGGAAGATGATGGGATAATGGAGTCTCTCAGGCTGAAGAGGAAATTACCTTCCAAAGATAAGGAGCCTGAACTTGAGAAGAAACAGAAGTTATCAAAGAATTCTAAATCTAAAGATAGTGTTTTTGCTGCCTTGTGTTCAACATTGAGCCAAGCTGTGCTACCTAGTAAGAAAACATCAATCGACATTCATACATGTGCTCGAACAGATGGGAGGATGAGCTCAAGCGAAGATAATCAGGGGGATGTACAAAATATTTCTAGAAGCAGCAGTTCCAATAATAGCAACATTGCAGCAGAAGACAATCACGTAGAGAAAGAAGGTGAAGCCTCTAGAAGCTTTTCTGATTGCTTGCATGCAAAATCAGATAACATACAATTGGGTGGAGAAGAACGTCCATTGGTTGCCCCAAAATCCTCACCAGAGATGGCTGTAAATGGATCCTAA 2646 0.3983 MGAPEKSQPNTNSMQRVKVYRLNDDGKWDDQGTGHVSVDYLERSEELGLFVYDEEDNENILLHRISSDDIYRKQEDTIISWRDPEYATELALSFQEPSGCSYIWDNICNVQRNMHFNTLNSEPFHSVSSEPRELPAVELSTLPLILKTVVDSGFADQLRLTELILSDQAFFRKLMEVFRMCEDLENIDGLHMIFKIVKGIVLLNSSAIFERIFSDDFIVDIIGALEYDPEVPFVQHHRKFLKEHVVFKEAIPIKDPVVLSKIHQTYRVGFLKDVVLARVLDEGIGANLNSIIHSNNAYVVSLLKDDSTFIQELFARLKSPTTSQESKKNLVYFLHEFCSLSKSLQMVQQLRLFRDLMNEGIFDVVTNVLQSQDKKLVLTGTDILILFLNQDPNLLRSYFVRQEGFALLGLLVKGMLTDFGENMHCQFLEILRNLLDSCTLSGPQRDTIIDIFFERHLGQLIEVITASCPSENTADASGKSIGPGRRIQCQIGTKPEILSNICELLCFCVLHHPYRIKCNFLLNNVIEKILLLIRRAERYLVVGAVRFIRTILSRHDEHLINYFVRNNVLKPIIDAFVSNGNRYNLLHSAVLELFEFIQKENLKLLLKYIVDSFWDQLMKFEYLASIHSLKVKYDQCLDNGGTKDATAVEDIRRRNDERALEREEERYFNEDSDEEDSASASVPRNQKGHQQPNLSNGVAASYSQLSPRSLVDYEDDEDDEDYKPPPREQPETSEEDDGIMESLRLKRKLPSKDKEPELEKKQKLSKNSKSKDSVFAALCSTLSQAVLPSKKTSIDIHTCARTDGRMSSSEDNQGDVQNISRSSSSNNSNIAAEDNHVEKEGEASRSFSDCLHAKSDNIQLGGEERPLVAPKSSPEMAVNGS* 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0262 881 Gene3D - 288 614 IPR011989 -
Gso17g0262 881 SUPERFAMILY PH domain-like 15 111 - -
Gso17g0262 881 SUPERFAMILY ARM repeat 287 628 IPR016024 -
Gso17g0262 881 Gene3D - 10 127 IPR011993 -
Gso17g0262 881 MobiDBLite consensus disorder prediction 723 768 - -
Gso17g0262 881 MobiDBLite consensus disorder prediction 802 832 - -
Gso17g0262 881 PANTHER BINDING PROTEIN-RELATED 1 817 - -
Gso17g0262 881 Pfam Phosphatase 4 regulatory subunit 3 168 356 IPR006887 -
Gso17g0262 881 MobiDBLite consensus disorder prediction 662 772 - -
Gso17g0262 881 MobiDBLite consensus disorder prediction 800 881 - -
Gso17g0262 881 PANTHER ATP SYNTHASE GAMMA-RELATED 1 817 - -
Gso17g0262 881 MobiDBLite consensus disorder prediction 833 849 - -
Gso17g0262 881 MobiDBLite consensus disorder prediction 679 708 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0262 Gso-Chr17 2374508 2393202 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0262 K17491 - gmx:100786790 1698.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0262 17 2374508 2393202 Gso17g0262 17 2374508 2393202 ECH
Gso7g2038 7 44352825 44368824 Gso17g0262 17 2374508 2393202 GST
Gso17g0262 17 2374508 2393202 Gso15g1189 15 11786573 11809067 PCT
Gso17g0262 17 2374508 2393202 Gso9g0323 9 3108742 3123880 PCT
Gso15g1189 15 11786573 11809067 Gso17g0262 17 2374508 2393202 PCT
Gso9g0323 9 3108742 3123880 Gso17g0262 17 2374508 2393202 PCT