Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0256 ATGATGGTGAGAGCACGGCCAAGGGACATAGATCACTTGCCCAAGAACGCCGCCAACTACACAGCGTTAACGCCGTTGTGGTTTCTAGAAAGAGCTGCTACGGTGCACCCCACCAGAAACTCCCTCATCCATGGATCTCGTCACTACACGTGGCAGCAGACTTATCACCGTTGCCGTCGATTCGCGTCCGCTCTTTCTAACCATTCCATCGGTCTCGGAAACACTGTTGCTGTAATTGCACCCAATATTCCAGCTGTTTATGAAGCTCACTTTGGGATTCCAATGGCTGGGGCTGTGTTGAACCCTCTTAATATTAGGCTAAATGCATCCACAATAGCTTTTCTTCTTGGTCATTGCACAGCTGCAGCAGTAATAGTTGACCAAGAGTTCTTTTCTTTAGCAGAAGAAGCTTTGAAAATATGGTCTGAGAAGGCCAAAACCTTCAGCCCTCCACTTTTAATAGTCATTGGTGATGAAAATTGCGACCCTAAGGCACTTAAATATGCTCTGGGCAAAGGAGCCGTTGATTATGAGGATTTTCTCCAGAGTGGAGATCCAGAATATGCATGGAAACCCCCAGAGGATGAGTGGCAGAGCATTTCATTGGGTTACACATCCGGTACCACTGCTAGTCCGAAGGGTGTGGTTTTACATCACCGTGGAGCCTATCTCATGTCTCTGAGTGGAGCTCTTATTTGGGGAATGACTGAAGGAGCTGTGTATCTTTGGACACTTCCCATGTTTCATTGCAATGGTTGGTGTTACACTTGGACACTTGCAGCTCTGTGTGGTACAAACATATGCCTTCGGCAGGTAACACCGAAGGCAGTATATGAAGCCATTGCCAAGTATAAAGTGAGTCATTTTTGTGCAGCACCAGTGGTTCTTAACACAATAGTTAATGCCCCAGCCGAGGACACCATTCTTCCTCTACCCCATGTTGTGCATGTGAATACAGCTGGGGCTGCTCCTCCTCCTTCTGTTCTTTCCGGCATGTCTGAACGAGGATTTCGTGTCACACACACTTATGGTCTCTCAGAAACCTATGGCCCCTCCGTCTATTGTGCCTGGAAACCAGAATGGGAATCACTTCCCCCTGAAAACCGAGCCCGGCTCAATGCAAGACAAGGTGTTAGGTACGTTGGCTTGGAAGGCCTGGATGTGGTGAACACAAAAACCATGGAACCTGTTCCTGCTGATGGTAAAACTGTTGGTGAGATTGTGATGCGGGGTAATTCTGTGATGAAAGGCTACTTAAAGAACCCTAAAGCTAACGAGGAGACCTTTGCAAATGGATGGTTTCATTCCGGGGATCTTGCTGTGAAGCATCCAGATGGGTATATAGAAATTAAAGACAGATCAAAGGACATCATAATCTCTGGTGCTGAAAACATCAGCAGTGTAGAGATAGAGAATACTCTTTACTCGCACCCTGCAATACTGGAAGCAGCAGTGGTTGCAAGGGCAGATGAGAAATGGGGCGAGTCTCCCTGCGCTTTTGTGACATTAAAGCCAGGAGTGGATAAAAGCAATGGGCAGCGTATAATTGAGGATATACTAAAGTTCTGCAAAGCCAAGATGCCTGCTTATTGGGTTCCAAAATCAGTTGTGTTTGGAGCCTTACCTAAGACAGCTACTGGGAAGATACAGAAGCATATACTGAGGGCCAAGGCAAAAGAGATGGGACCTGTAAAGTTGAGTAAGCTATAA 1710 0.4673 MMVRARPRDIDHLPKNAANYTALTPLWFLERAATVHPTRNSLIHGSRHYTWQQTYHRCRRFASALSNHSIGLGNTVAVIAPNIPAVYEAHFGIPMAGAVLNPLNIRLNASTIAFLLGHCTAAAVIVDQEFFSLAEEALKIWSEKAKTFSPPLLIVIGDENCDPKALKYALGKGAVDYEDFLQSGDPEYAWKPPEDEWQSISLGYTSGTTASPKGVVLHHRGAYLMSLSGALIWGMTEGAVYLWTLPMFHCNGWCYTWTLAALCGTNICLRQVTPKAVYEAIAKYKVSHFCAAPVVLNTIVNAPAEDTILPLPHVVHVNTAGAAPPPSVLSGMSERGFRVTHTYGLSETYGPSVYCAWKPEWESLPPENRARLNARQGVRYVGLEGLDVVNTKTMEPVPADGKTVGEIVMRGNSVMKGYLKNPKANEETFANGWFHSGDLAVKHPDGYIEIKDRSKDIIISGAENISSVEIENTLYSHPAILEAAVVARADEKWGESPCAFVTLKPGVDKSNGQRIIEDILKFCKAKMPAYWVPKSVVFGALPKTATGKIQKHILRAKAKEMGPVKLSKL* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0256 569 CDD ttLC_FACS_AEE21_like 20 556 - -
Gso17g0256 569 Gene3D - 9 455 IPR042099 -
Gso17g0256 569 PANTHER DEPENDENT LIGASE, PUTATIVE-RELATED 8 569 - -
Gso17g0256 569 Pfam AMP-binding enzyme C-terminal domain 469 548 IPR025110 -
Gso17g0256 569 Pfam AMP-binding enzyme 29 460 IPR000873 -
Gso17g0256 569 SUPERFAMILY Acetyl-CoA synthetase-like 15 560 - -
Gso17g0256 569 PANTHER ACYL-ACTIVATING ENZYME 8 569 - -
Gso17g0256 569 Gene3D - 456 563 IPR045851 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0256 Gso-Chr17 2323031 2327310 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0256 2 569 Miscellaneous Gene Families AT3G16910 74.165 0.0 907
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0256 K01913 - gmx:100808187 1172.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0256 17 2323031 2327310 Gso17g0256 17 2323031 2327310 ECH
Gso7g2044 7 44404961 44408849 Gso17g0256 17 2323031 2327310 GST