Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1641 ATGGGGAACACGTTCTGCTTGTTCTGTGGTTGCGTTGCTCAATCCAGCGTCGGCGTCGTCGAACAGTGGGGTCGCTTCCACCGCCTCGCCCAACCCGGCTTCCACTTTTTCAACCCTCTCGCCGGCGAATGCCTCTCCGGTATCCTCTCCACCAGGATCTCCTCCCTCGATGTCCGCATCGAAACCAAAACCAAGGACAATGTGTTTGTGCAGTTGCTGTGTTCGATTCAATACCGAGTGATTAAGGAAAACGCTGATGATGCTTTCTATGAGTTGCAAAACCCTCAGGAGCAGATCCAGGCTTATGTTTTTGATGTGACTCGTGCTATTGTTCCGAGAATGAACTTGGACGAGCTGTTTGAGCAGAAGGGTGAGGTTGCCAAAGCTGTCTTGGAGGAACTTGAAAAGGTGATGGGAGAATATGGATATAGTATAGAGCACATACTCATGGTTGATATTATACCTGATCCTGCTGTGCGTAAGGCAATGAATGAGATCAATGCAGCTCAAAGGATGCAACTTGCTAGTCAGTACAAAGGAGAAGCTGAAAAGATTTTGCTAGTTAAAAAAGCAGAGGCCGAAGCTGAAGCCAAGTATTTGGGTGGGGTTGGTGTAGCAAGGCAGCGACAAGCTATCACAGATGGTTTGAGAGAGAACATCCTCAATTTCTCTCACAAGGTAGAAGGCACTAACGCTAAGGAGGTGATGGATCTTATCATGATTACTCAGTACTTTGACACAATCAAAGACCTTGGGAATTCATCAAAGAATACCACTGTTTTTATACCCCATGGACCTGGCCACGTTAGGGATATTGGTGAGCAGATACGCAATGGACTGATGGAAGCAGCCAGTGCTCAAGTAAATGTGGAGGAGTGA 879 0.4721 MGNTFCLFCGCVAQSSVGVVEQWGRFHRLAQPGFHFFNPLAGECLSGILSTRISSLDVRIETKTKDNVFVQLLCSIQYRVIKENADDAFYELQNPQEQIQAYVFDVTRAIVPRMNLDELFEQKGEVAKAVLEELEKVMGEYGYSIEHILMVDIIPDPAVRKAMNEINAAQRMQLASQYKGEAEKILLVKKAEAEAEAKYLGGVGVARQRQAITDGLRENILNFSHKVEGTNAKEVMDLIMITQYFDTIKDLGNSSKNTTVFIPHGPGHVRDIGEQIRNGLMEAASAQVNVEE* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1641 292 PANTHER HYPERSENSITIVE-INDUCED RESPONSE PROTEIN 4 1 288 - -
Gso16g1641 292 Gene3D Band 7 domain 47 169 IPR036013 -
Gso16g1641 292 PANTHER STOMATIN-LIKE PROTEIN 2, MITOCHONDRIAL 1 288 - -
Gso16g1641 292 CDD SPFH_like_u4 11 280 - -
Gso16g1641 292 SMART PHB_4 7 167 IPR001107 -
Gso16g1641 292 SUPERFAMILY Band 7/SPFH domain 48 172 IPR036013 -
Gso16g1641 292 Pfam SPFH domain / Band 7 family 14 184 IPR001107 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1641 Gso-Chr16 37104602 37106501 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1641 - - gmx:100788194 556.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1641 16 37104602 37106501 Gso16g1641 16 37104602 37106501 ECH
Gso16g1641 16 37104602 37106501 Gso9g1270 9 36249760 36252266 GST