Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1639 ATGCCCCAAAACGACACCCACTCCCACCAAAACGGTGAAGCCACCGTCACCACCTCCTCCTCCTCCCAGCATCCCGTTCTAACCCTCCAGCTCCAAGCAATGACCTCCACCACCACCTCCACCTCCACCGACCCCCTCCCCTTCTCCTCCGACGCCGGCGCCCTCCGCGCCATCAACAAACGCTTCGAGGGCCTCCTGACCGTCCGCACAAAGGCCATGAAGGGCAAAGGAGCCTGGTACTGGGCCCACCTGGAGCCCATTCTGGTTCCCCACCCCGACACCGGCCTCCCCAAATCCGTGAAACTCAAATGCTCCCTCTGCGACTCCCTCTTCTCCTCCTCCAACCCCTCACGAACCGCTTCCGAACACTTTAAACGTGGTACATGCTCCAACTTCACCTCCTCTCTCAGACCCCCTTCTCCACTCCCTATTTCCTCCATCACCCCCGCTCCCCGCAAGCGTCCCTCCCCCGCCACCTCACCTCCTTCCTATCAAAATCACTCCTTGCCCATTCTCCACTCTTCCCACTTCCAAATCTCTCACGCCAATACTGCACACTCGCATAATCACCACCACCACCACCAGCATTTAATGTTGTCTGGTGGGAAAGATGACTTGTGTGCTCTTGCAATGTTTGAGGATAGTGTGAAGAAGCTAAAAAGTCCCAAGACTTCTCCTGGTCCTGCTTTGAGCAAGGACCAGGTGAATTCTGCTTTGGACTTGCTCTTCGACTGGTTCTATGAAAACTCCGTGTCTTTGTCCATGATCGAGCACCGAAAGTTTCAGGCCTTTTTGAGCCAGGTTGGCTTGCCCAACAAGTTGGGGAGGGAGATTTCTGGGGAGAGGCTTGATGCTAGGTTCGTGGAGGCCAAGGCTGAGTCCGAGGCTAGGATAAGGGATGCCATGTTTTTTCAGTTGGCCAGCGACGGGTGGAAGTGTGGGGATTGGTTTAACTTGGACTTTTGTTGCGGTGGTGATTGTGGTGGTGTAGGCGGCGGGGAGAGTTTGGTTAAGTTTGTGGTGAATCTCCCCAATGGGAGTAGTGTGTTTCAGAAGGCCGTGTTTAATGGGGGAGTGGAGAATTCCAAGTATGCTGAGGAGGTTATATGGGAGATGGTTACGGAGGTTACCGGGAGTGTGGTCCAGAGGTGTGTGGGTATTGTGGCGGACAAGTTTAAGGCGAAGGCGTTGAGGAACTTGGAGGTGCAGCACCATTGGATGGTCAACACAGCTTGCCAGCTTCAGGGGTTGACTAGCTTGATCAAGGATTTTAACTGTGAGCTGCCGCTTTTCAGGGTTGTGATTGAGAATTGTTTGAAGGTTGCTAATTTTATAGACAATGAGTTGCATTTGAGGAGTGTTTTCCTCAAGTACAGGATGCAGGAGATGGACTGTGGTGGGTTGATTCGCGTGCCTTCGCCGAAATGTGATCCGTTGAAGAACTTTGGAGTGGCGTTTCCTACGTTGGAGGATACGTTGAGCTGTGCTAGAGTGATACAGAGGGTGGTGATGGAGGATGGGTTTAAGGTGATGTGTATGGAGGATCCACTGGCGAGGGAGGTCGCGGGGATGGTGCAAAATGAGGGGTTTTGGAATGAGTTGGAGGCTGTTTATTCGCTTGTGAGGCTCGTTAAAGGGATGGTGCAGGATGTTGAGACAGAGAGGCCCTTAATTGGTAGGTGTTTGTCTCTTTGGGAGGAGCTGAGGAGCAAGGTGAAAGAGTGGTGTGGGAAGTACAACATTGTGGAAGGACATGCGGAGAAGATAGTTGAAAAGCGGTTTAGGAAGAATTATCACCCTGCTTGGGCAGCAGCGTTTATACTTGATCCACTTTACTTGGTTAAGGATGCTAGTGGGAAGTATCTTCCTCCGTATAAGTGTTTGACGCGCGAACAGGAGAAGGATGTAGATAAGTTACTGACGAGGCTGGCTTCCCGGGAAGAGGCTCATGTTGTGTTGATGGAGCTAATGAAGTGGAGGTCAGAGGGGCTTGATCCGCTCTATGCACAGGCTGTTCAGATGAAGCAAAAGGATCCAGTAACCGGAAAGATGAAAGTTGCTAATCCATTAAGTAGTAGACTTGTTTGGGAAACATGTTTGAGTGAATTTAAATCCCTGGGAAAGATTGCTGTTAGGCTCATTTTTCTGCATGCAACTTCAAGTGGGTTTAAGAGTAACTCGTCTTTCACTAGGAAAGTTTCAGCTAATAAACACTCAAGAGTTACCTTGGAGAGGGCTCAGAAAATAATATATATTGCAGCTCATGCCAAACTTGAAAGGAGAGACTTTTCTAATGGAGAAGAGAAGGACGCAGAGCTGTTTGTCATGTCCAATAGTGAGGATGACATGCTTGAGGTTTATGCTGATGCTCCCTTAGTGTAA 2382 0.5042 MPQNDTHSHQNGEATVTTSSSSQHPVLTLQLQAMTSTTTSTSTDPLPFSSDAGALRAINKRFEGLLTVRTKAMKGKGAWYWAHLEPILVPHPDTGLPKSVKLKCSLCDSLFSSSNPSRTASEHFKRGTCSNFTSSLRPPSPLPISSITPAPRKRPSPATSPPSYQNHSLPILHSSHFQISHANTAHSHNHHHHHQHLMLSGGKDDLCALAMFEDSVKKLKSPKTSPGPALSKDQVNSALDLLFDWFYENSVSLSMIEHRKFQAFLSQVGLPNKLGREISGERLDARFVEAKAESEARIRDAMFFQLASDGWKCGDWFNLDFCCGGDCGGVGGGESLVKFVVNLPNGSSVFQKAVFNGGVENSKYAEEVIWEMVTEVTGSVVQRCVGIVADKFKAKALRNLEVQHHWMVNTACQLQGLTSLIKDFNCELPLFRVVIENCLKVANFIDNELHLRSVFLKYRMQEMDCGGLIRVPSPKCDPLKNFGVAFPTLEDTLSCARVIQRVVMEDGFKVMCMEDPLAREVAGMVQNEGFWNELEAVYSLVRLVKGMVQDVETERPLIGRCLSLWEELRSKVKEWCGKYNIVEGHAEKIVEKRFRKNYHPAWAAAFILDPLYLVKDASGKYLPPYKCLTREQEKDVDKLLTRLASREEAHVVLMELMKWRSEGLDPLYAQAVQMKQKDPVTGKMKVANPLSSRLVWETCLSEFKSLGKIAVRLIFLHATSSGFKSNSSFTRKVSANKHSRVTLERAQKIIYIAAHAKLERRDFSNGEEKDAELFVMSNSEDDMLEVYADAPLV* 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1639 793 MobiDBLite consensus disorder prediction 1 24 - -
Gso16g1639 793 MobiDBLite consensus disorder prediction 130 165 - -
Gso16g1639 793 PANTHER OSJNBA0013A04.12 PROTEIN 45 786 - -
Gso16g1639 793 PANTHER PUTATIVE ISOFORM 1-RELATED 45 786 - -
Gso16g1639 793 MobiDBLite consensus disorder prediction 142 158 - -
Gso16g1639 793 SUPERFAMILY Ribonuclease H-like 369 759 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1639 Gso-Chr16 37088053 37090838 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1639 - - gmx:100814598 1323.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1639 16 37088053 37090838 Gso9g1269 9 36230915 36233843 GST
Gso16g1639 16 37088053 37090838 Gso10g1614 10 42670250 42672804 PCT
Gso10g1614 10 42670250 42672804 Gso16g1639 16 37088053 37090838 PCT