Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1634 ATGGTTGATACCCTTGAAGAAAAGGTGACTCCTGATATGAAAAAGGATCCAATTGTTGTTGTTGTTGGTACTGATGCTCAGCCCGGCAATGATCTGGCGGAGTCTGAAACACCGCCAGAGTCTGAGCCGAGCAATTTGGAAACACGGCCTAACAAGGAACTTCCTGCTTCTGAAACACTGGCTACTAATGGTGAAGCAGTGGCGGCATTACCCAACCAATATTTGGGCAACTCTGAAGAACCTATGAATGACCATCTGGAGAATTGTGAATCACTAACCAGCAACCAGCCAGACAATGCTGAGGCCTCATGGAGCAGTCAGACAGGTGATTCCAAGGCAGTTCCCACCAATCAGTCTGCTAACTCTGAAGATTTGTCTAACAGTGGTCAGTTGGTTAGTTCTGAAGCACCTCTTGATATGAAGATGAAGGCTTCTCAACCCAGCAACCAGCAGCACAGTGATGAGGTGGTTACATCTGAAACCGTGCAAGGCAATGAAGGGATCATTTCTGAGACTCAGCAAAGCTATGAGGTGGTCATGTCTGAGACACAGCCTGACAATGAAGCCAACATGCTCAAAACTCAGACATGCAATGATCAGGTCATCTCAGAAGCTCCGCCTGAAAATGAGTTGGCTAATCATACAAGGAATCATAACAATCTGCTCTCCCATTCTGAAACTGGTCCTGAAAATCAATTCACTAATCTCTATATGATTCCTGAAGATCAGCTGCCTCAACCTGAATCACTGCCTCATTCAGAACCACTACCTTATTCTGAACCACTGACAGATACTCATCTATCAGACATCAAAGTAATGTATCATAATCATCTGAGTCATTATGAAACACTGCCCAACGATCATCCAAACCATTCAGAGGCTGTATCCCTCAATCAGCTATCGAACTCTGAAGCATTGTCCCATAATCAGCTGGCCAATTCCCAAATGCTGTCTCATTATGAGCTGGAAAATACTGAAACAATGCACCACAATCAGATAGTCAATTCTCAAGCAAACTATGAAATGACCTTTTCTGATGCCATACCCAGCTACGAGATAATAAATGCTGAGACACCCCTGAACAATGAGGATTGTATCCCAGAAGCGCAACCTATCAAGCGAAGGAAAAAGAAGTCTATAGTCTGGGAACACTTCACAATTGAAGCAGTTAGTCCTGAATGTAGAAGGGCACGCTGCAAGCAATGCGCTCAAACTTTTGCCTATAGTACAGGTTCAAAAGTTGCTGGCACCAGCCATCTCAAACGCCATGTAGCCAAGGGGACCTGCTCAGCTCTTTTGCGCAACCATAACCGTAATCAGTTGACCCCATATGCTGCACGAACTAGGAGAAGTGGGACTGGAGATGCTAGCAGTACACGGAAAAGACAATATAGATCCCCTAGTATGCCGTATGTCATTTTTGATCAAGATCAATGCCGCAATGAGATTGCTAGGATGATCATTATGCATGATTACCCCCTTCACATGGTTGAGCATTCGGGATTTGTTGCATTTGTCCAAAATCTGCAGCCCCAGTTCAAAATGGAGACCTTTAACTCTATCCAGGGAGATTGTGTTGCAACTTATCTGATGGAAAAGCAACATCTTTTGAAGTGTATTGATGGATTACCTGGACGTGTTTGTTTGACACTGGACATCTGGACATCAAGTCAATCTTTAGGTTATGTATTTATCACAGGACATTTTGTTGATCATGATTGGAAGTTGCAGAGGCGAATTCTCAATGTTGTAATGGAACCATTTCCTGATTCAGATTCTGCACTCACCCATGCTATAGCTGTTTGCCTTTCTGATTGGGGGTTGGAGGGTAGGCTGTTTTCTATCACTTGCAATCAAGCACTGAGTAATGTTGCCCTTGAACATCTCAGACCATTACTCTCTGTGAAGAATCCACTTATCCTCAATGGTCAGTTGCTAGTTGGTAATTGCATTGCCTGTACTTTAAGCAGTGTTGCAAAGGATTTATTGGGTTCAGCACAAGACTTGATCAATAAAATTCGTGATAGTGTAAAATACGTGAAGATTTCAGAATTACATGAGGAAAAATTCTTGGAGCTGAAGCGGCATCTTCAGGTTCCTAGTGAAAGGAGCCTTTTTATTGATGACCAAATTCATTGGAATAGGTCATATCAAATGCTTGTGGCAGCTTCTGAGCTAAAGGAAGTTTTTTCTTGTTTGGACACTTCTGATCCTGATTACAAGGGAGCCCCCCCATCTATGCAGGATTGGAAGCTGGTTGAGATCCTCTGTAGCTACTTGAAGCCACTTTTTGATGCAGCAAACATTCTTACTACAACAACTCATCCCACTACTATTGCCTTCTTTCACGAAGTTTGGAAGTTGCAGTTAGATGCAGCTCGTGCAGTTACGAGTGAAGATCCCTTCATTAGCAACCTTAATAAAATTATGAGTGAAAAGATTGATAAGTATTGGAGAGAGTGTAGTCTGGTTTTGGCTCTTGCAGTAGTTATGGATCCTCGTTTTAAGATGAAACTTGTGGAGTTCAGTTTCACAAAAATCTATGGTGAGGATGCTCATTTCTATATCAGGACTGTGGATGATGGAATTCAGGAGCTGTTTCATGAGTATGTAGCCCATCCCCTACCACTAAGACCGGTGTATTCTGAAAATGGAAGTGCTGAAAGCCACAGTAAGATGGAGGAATCCCCAGGAGGTGCTGTGTTGTCTGATAATGGTCTTACAGATTTTGATGCCTATATCATGGAAACCACTAGCCAACAGACGAAATCTGAGCTAGATCAGTATCTTGAAGAATCACTGTTACCACGTGTACCAGACTTTGATGTATTAGCTTGGTGGAAGCTAAACAAAATCAAGTATCCTACTCTTTCCAAGATGGCCCGGGATATATTATCCATTCCAGTTTCTACGGTTGCTCCTGATTCTGTGTTTTATTCAAAAAGCAAAGAAATTGATGAGTATCGGAGTTCCTTGCGGCCAGAGACACTGGAGGCTCTTGTATGTACCAAGGACTGGATGCAGTATGGAACAACCGCTGAATCTATTAATGCACTTCAGCACTTGTGA 3069 0.4288 MVDTLEEKVTPDMKKDPIVVVVGTDAQPGNDLAESETPPESEPSNLETRPNKELPASETLATNGEAVAALPNQYLGNSEEPMNDHLENCESLTSNQPDNAEASWSSQTGDSKAVPTNQSANSEDLSNSGQLVSSEAPLDMKMKASQPSNQQHSDEVVTSETVQGNEGIISETQQSYEVVMSETQPDNEANMLKTQTCNDQVISEAPPENELANHTRNHNNLLSHSETGPENQFTNLYMIPEDQLPQPESLPHSEPLPYSEPLTDTHLSDIKVMYHNHLSHYETLPNDHPNHSEAVSLNQLSNSEALSHNQLANSQMLSHYELENTETMHHNQIVNSQANYEMTFSDAIPSYEIINAETPLNNEDCIPEAQPIKRRKKKSIVWEHFTIEAVSPECRRARCKQCAQTFAYSTGSKVAGTSHLKRHVAKGTCSALLRNHNRNQLTPYAARTRRSGTGDASSTRKRQYRSPSMPYVIFDQDQCRNEIARMIIMHDYPLHMVEHSGFVAFVQNLQPQFKMETFNSIQGDCVATYLMEKQHLLKCIDGLPGRVCLTLDIWTSSQSLGYVFITGHFVDHDWKLQRRILNVVMEPFPDSDSALTHAIAVCLSDWGLEGRLFSITCNQALSNVALEHLRPLLSVKNPLILNGQLLVGNCIACTLSSVAKDLLGSAQDLINKIRDSVKYVKISELHEEKFLELKRHLQVPSERSLFIDDQIHWNRSYQMLVAASELKEVFSCLDTSDPDYKGAPPSMQDWKLVEILCSYLKPLFDAANILTTTTHPTTIAFFHEVWKLQLDAARAVTSEDPFISNLNKIMSEKIDKYWRECSLVLALAVVMDPRFKMKLVEFSFTKIYGEDAHFYIRTVDDGIQELFHEYVAHPLPLRPVYSENGSAESHSKMEESPGGAVLSDNGLTDFDAYIMETTSQQTKSELDQYLEESLLPRVPDFDVLAWWKLNKIKYPTLSKMARDILSIPVSTVAPDSVFYSKSKEIDEYRSSLRPETLEALVCTKDWMQYGTTAESINALQHL* 1023
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1634 1022 PANTHER BED FINGER-RELATED 337 1010 IPR045259 -
Gso16g1634 1022 SUPERFAMILY Ribonuclease H-like 538 1008 IPR012337 -
Gso16g1634 1022 MobiDBLite consensus disorder prediction 1 62 - -
Gso16g1634 1022 SMART bed5 376 432 - -
Gso16g1634 1022 SUPERFAMILY beta-beta-alpha zinc fingers 379 427 IPR036236 -
Gso16g1634 1022 PANTHER - 337 1010 - -
Gso16g1634 1022 MobiDBLite consensus disorder prediction 75 131 - -
Gso16g1634 1022 ProSiteProfiles Zinc finger BED-type profile. 376 436 IPR003656 GO:0003677
Gso16g1634 1022 Pfam hAT family C-terminal dimerisation region 925 1007 IPR008906 GO:0046983
Gso16g1634 1022 MobiDBLite consensus disorder prediction 37 58 - -
Gso16g1634 1022 Pfam Domain of unknown function (DUF4413) 772 870 IPR025525 GO:0003677
Gso16g1634 1022 MobiDBLite consensus disorder prediction 442 462 - -
Gso16g1634 1022 MobiDBLite consensus disorder prediction 87 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1634 Gso-Chr16 37013161 37017302 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1634 - - gmx:106796566 2030.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1634 16 37013161 37017302 Gso16g1634 16 37013161 37017302 ECH