Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1628 ATGTCTGTTTCTGCGTCACAAACCGAAGAACAAGTCTCAACTAGAAAACCAACAACACTGTGTGAAGAATGCAAATCGAACCCATCGAAATACACGTGCCCTGGTTGCTCCTTACACTCGTGCAGTCTTCCATGCGTGAAGTCTCACAAAGAGCGAACTGGGTGTAGTGGCAAGAGGAACCAGACTCAGTTTCTTCCTCTTTCGAAGTTTGATGACAGTGTCCTGTTATCTGACTATAATTTGCTGGAGGAGGTGAAGAGGGTGGCTGAATCTGCTCAAAGAATGAGAAATAAATTGGGCATTTATGCCTATTTTAAGTTACCTCGTTACCTTAGAAGCCTAAAGAATGCTGCTGGGAGCAGGAGAACCAAACTGATGTTTCTCCCTAATGGAATGTCTAAAAGAGAGAAGAACCGGTCTCAATATGACCAGAGGAAGAAGTTTATATCTTGGACAATTGAATTACATTTTCACTCAACAGATATTGTTTTACTCGACCATGGAGTTGATGAAAATACAAGCTTTTACTCCATTCTAGAGAAGCACCTCATGCCTGGTCCTTGGAAGAATCAGCTAAAGCAATTCTGTGAAGTCCAGCTGGATTGTCTAAAGCTTTTCATTCGTAAATACCCGAAGGGTCCCAAGTCACCTTTCAAAGAGTTGGATATAAAAGCGCCAATCAGACAACAATTAGCAAATATAGTCATTTTGGAGTTTCCTGTTGTTTTTGTTTTCTTGCCATCTCATAGAATCAATTTTGAAGTTATTAAGGATGTCAATACCAGCAAGCATAAATCACTGCAGAAAGATTGTGAAGACAACCAAATCCCTCAAGGTTTATCATTTAGGGAGGAAGTGATAGAAGATGACAACAACTCTGCAGATCCTCGGGTTCTTGATCTCATGAAGCAAGTGGAATCAAGTTTATCGCATGAAGTGATGACCCAAAATATGAGTTCTGAGAAAGCACCAAATGATTCCTCAGAGAAGTCTCTGTTTGAAGGAGCTACTGGGGGTAATCTTTCGAATTCTTTGATGGAAACCAATGAACTAAAATTCTCTGAAGATATGGCATTTGACTTTGATCAGGATTTGATGGATTTCTATACTGATATATTGGATCAGACAAATCCTGGTGATCTTTTTGATTTTGATAGTGAATTTGCCAATAAAGCAGAAAATGAAATTGATTTAATTGGTACTAGTGAATTATTCCCTTTGCCAGAGGAATTGGAGGAAGGGGAAATTTTAGAATAA 1257 0.3914 MSVSASQTEEQVSTRKPTTLCEECKSNPSKYTCPGCSLHSCSLPCVKSHKERTGCSGKRNQTQFLPLSKFDDSVLLSDYNLLEEVKRVAESAQRMRNKLGIYAYFKLPRYLRSLKNAAGSRRTKLMFLPNGMSKREKNRSQYDQRKKFISWTIELHFHSTDIVLLDHGVDENTSFYSILEKHLMPGPWKNQLKQFCEVQLDCLKLFIRKYPKGPKSPFKELDIKAPIRQQLANIVILEFPVVFVFLPSHRINFEVIKDVNTSKHKSLQKDCEDNQIPQGLSFREEVIEDDNNSADPRVLDLMKQVESSLSHEVMTQNMSSEKAPNDSSEKSLFEGATGGNLSNSLMETNELKFSEDMAFDFDQDLMDFYTDILDQTNPGDLFDFDSEFANKAENEIDLIGTSELFPLPEELEEGEILE* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1628 418 PANTHER BOX C/D SNORNA PROTEIN 1 14 395 - -
Gso16g1628 418 MobiDBLite consensus disorder prediction 311 339 - -
Gso16g1628 418 SUPERFAMILY HIT/MYND zinc finger-like 16 56 - -
Gso16g1628 418 Pfam HIT zinc finger 17 47 IPR007529 -
Gso16g1628 418 PANTHER UNCHARACTERIZED 14 395 - -
Gso16g1628 418 Gene3D - 5 62 - -
Gso16g1628 418 ProSiteProfiles Zinc finger HIT-type profile. 21 55 IPR007529 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1628 Gso-Chr16 36942387 36944762 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1628 - - gmx:100785007 808.135
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1628 16 36942387 36944762 Gso16g1628 16 36942387 36944762 ECH
Gso16g1628 16 36942387 36944762 Gso9g1257 9 36026116 36028828 GST