Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1599 ATGTACTCAACAAAGAGCATAGCTGATTCAGCATCATGGTGTTGTGCCTTGGCACTATTGTGTCTAATACTATTGGGGTCCATAAGGGAGAACCATGTGCCGGAGGAGGATGAAGCCACCGCGAGAGGGCGGAGCAACCTCTTTGAAAGGCCGTGTGATGAGATATATGTGGTGGGAGAAGGGGAGACCCTACACACCATAAGTGACAAGTGTGGTGACCCTTTTATTGTTGAACGCAACCCTCATATTCATGACCCTGATGATGTTTTCCCTGGCCTTGTCATCAAAATCACCCCCACACCCACATACACCAATACTAAGAAATTGTTCAAGAGGTAG 339 0.4749 MYSTKSIADSASWCCALALLCLILLGSIRENHVPEEDEATARGRSNLFERPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKITPTPTYTNTKKLFKR* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1599 112 Gene3D LysM domain 48 109 IPR036779 -
Gso16g1599 112 Pfam LysM domain 56 98 IPR018392 -
Gso16g1599 112 PANTHER EMBRYO SAC 1 3 102 - -
Gso16g1599 112 PANTHER LYSM DOMAIN-CONTAINING PROTEIN, PUTATIVE-RELATED 3 102 - -
Gso16g1599 112 CDD LysM 55 97 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1599 Gso-Chr16 36572042 36572380 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1599 - - gmx:100789966 207.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1599 16 36572042 36572380 Gso16g1599 16 36572042 36572380 ECH