Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1583 ATGTCTGAAGTGAGAAACAAAGTGGATTTCATCCAGTTGCTTGGACCTGACATGTCAATCAAGATTCTCACCCATTTGGATGACCCTTGTGATCTTATTCGGGTTTCTTCTGTTTCCAGTTCTTGGCACCGATTTGTTATTGAACATGGCCTCTGCAAGCAACTTTGCTTGAAAATGTTTCCTGAAATATCTGGTGTTGCTCATATAATTGAGCTTGACAACATTATTGAACCACTAAGCAACACTCTTGGCAGTTATGTAAGTTGGGAGTCTCATAAGAGAAATCATAGAGTCTATGCATTTTTGGCTTCTGGTCTTTCTCCTATGAGGAAAAATTGCATCTCAAAAGCCATTAGTGCATCCAGCACTGATAACTACCCTGAAGAAAGCATTCTACATACGTTGGAGCCTGGGGATAGAACTGAATATAGAGCATCATACTGGTCAAGCAAAGGGGAAAGCGATCCTTCTGTTCCTGAGACTTTAGTTTATGAGCTAGCTTCAAAATTATGTCTTGTTACGGAGATTTATGTCCATCCATTCCAAGCATATTTTCAGCATGGCTTCCCTATATATTCTGCTAAGGCTGTCCGATTCAGAATGGGCCATTCGAAACACCCAATGGAATTAGAGAGTCCTGTGGACAACATGGCTGCTAATCACGTCTTGGGCAATAATCAATTCATATGGACATATACATCACCTGAATTTCCAATGCTTCAAGAAAACCGCTTGCAAAAATTCAAGCTACCTGAACCTGTTCTGTGCATTGGAGGTGTACTGCTAGTTGAGCTGTTGGGTAGAGTTCAAAAGCAAGAAATGGATGAATTATTCTATATATGCATCTCTCATGTTCAAGTTATGGGACGACTGCTTTTTCCGGAATTTGATGTCAAAATTCATCATCGATCAGGAAAGTGTACCTTGAAATACTGCCCTCAAACAGATTGTTATATGTCTTCTCCAACATCATCACCGAGAAGCAACTCGAGTAATCCGTCACGCCTGCGGACCATAACCTCAAGCATAATGCAGAGGGGTGTGAGACGTTGGGAGCAATTTCTCTTGGGTGCATTGCTTGGTACTGGTCCTGTTGTAGTTGATAATGAAGATCAATGA 1119 0.412 MSEVRNKVDFIQLLGPDMSIKILTHLDDPCDLIRVSSVSSSWHRFVIEHGLCKQLCLKMFPEISGVAHIIELDNIIEPLSNTLGSYVSWESHKRNHRVYAFLASGLSPMRKNCISKAISASSTDNYPEESILHTLEPGDRTEYRASYWSSKGESDPSVPETLVYELASKLCLVTEIYVHPFQAYFQHGFPIYSAKAVRFRMGHSKHPMELESPVDNMAANHVLGNNQFIWTYTSPEFPMLQENRLQKFKLPEPVLCIGGVLLVELLGRVQKQEMDELFYICISHVQVMGRLLFPEFDVKIHHRSGKCTLKYCPQTDCYMSSPTSSPRSNSSNPSRLRTITSSIMQRGVRRWEQFLLGALLGTGPVVVDNEDQ* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1583 372 Gene3D - 1 101 - -
Gso16g1583 372 SUPERFAMILY F-box domain 6 78 IPR036047 GO:0005515
Gso16g1583 372 PANTHER F-BOX DOMAIN CONTAINING PROTEIN, EXPRESSED 6 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1583 Gso-Chr16 36375855 36380742 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1583 - - gmx:100786763 738.799
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1583 16 36375855 36380742 Gso16g1583 16 36375855 36380742 ECH
Gso16g1583 16 36375855 36380742 Gso9g1201 9 34627924 34632915 GST