Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1579 ATGCTCAACGCCGATTCCACCTCGCCTTACCACCCCACAGCCAAACCCTCCAAACCCACCAGCACCTTCTTCAAAAAAACCAATCTTTACACCCTCCTGGCTTTTCTCTGCATCGTCTCCTACCTCCTCGGTGCATACCAAGGAACCACCACCAAAACAACAATAACAACAACAACAACACCATGCCCTCAAAACCCAACCTTAACAACCACTACTCACTTATTAGACTTTTCATCTCATCACAACTCCACAAACCTCAATCCTTCAACTTCGACCACCCTCCATTTCCCTCCTTGCCACGTGTCGCTCAGCGAGTACACCCCCTGCGAGGACCACGCGCGCTCCCTCCAATACTCGCGCAGAAGAATGGTCTACCGCGAGCGACACTGTCCGAGGAACAACGAGGTTCTGAAATGCCGTGTCCCCGCGCCGCACGGCTACCGGAACCCCTTCCCCTGGCCGGCGAGCCGCGACGTGGCGTGGTACGCCAACGTGCCCCACCGCGAGCTCACGGTGGAGAAGGCCGTCCAGAACTGGATCCGCTACGACGGCGACAGGTTCCACTTCCCCGGCGGCGGCACCATGTTCCCCGACGGAGCCGATAAGTACATCGACGACATTGCCGACCTCGTCAACCTCCGTGACGGCACGGTCAGAACCGCCGTGGACACTGGCTGTGGGGTTGCTAGTTGGGGAGCCTATCTTCTGTCACGTGACATCATAACAGTGTCAATTGCACCTAGGGACACCCACGAAGCACAAGTTCAGTTTGCTCTTGAAAGAGGAGTTCCTGCATTAATTGGGGTCCTAGCATCAAAGAGGTTGCCTTTCCCTTCTAGAGCTTTTGACATGGCACACTGCTCTCGATGCCTCATTCCTTGGGCTGAATATGATGGGCTTTATCTGAATGAAATTGATCGAATTCTACGCCCTGGTGGGTATTGGATTCTATCTGGGCCACCAATCCGGTGGAAGAAACATTGGAAAGGATGGGAAAGAACAAAGGAGGATTTGAATAAAGAGCAGACCAAAATTGAGAATGCAGCTAAAAGCCTGTGCTGGAACAAGCTAGTGGAGAAGGATGATATAGCCATTTGGCAGAAAGCCAAAAACCATTTGGATTGCAAATCCAATCGTAAGCTCACTCAAAACAGACCTTTCTGCAAGGCACAAAATAACCCTGACAAGGCCTGGTACACAGATATGCAAGCATGTTTGAGTCCTATGCCTGAAGTGTTCAGCAAAGAAGAAACTGCAGGCGGGGCATTGAAAAAATGGCCTGAAAGACTAAAAGCCACCCCACCAAGGATTTCTCGGGGGACCATAAAGGGTGTGAATCCCGAAACTTTCTCAAAAGATAATGAACTGTGGAAGAAAAGGGTAGCATATTATAAGAAGGCTAATAATCAACTAGGAAAAGCTGGGAGATACCGCAACCTTTTAGACATGAATGCTTACTTGGGTGGATTTGCTGCTGCACTTGTAGATTTACCTGTTTGGGTCATGAATGTGGTTCCTGTCCAGGCTAAGGTTGACACACTTGGTGCAATTTATGAAAGGGGGTTGATTGGAACATACCATAATTGGTGTGAAGCAATGTCTACTTATCCTAGAACTTATGACTTAATTCATGCTGATTCACTGTTCAGCCTCTACAATGACAGATGTGAATTGGAAGACATTTTATTAGAGATGGATAGGATTCTTAGACCTGAAGGAAGTGTGATCATCAGAGATGATGTTGATATATTGGTAAAGGTAAAAAGTATAGTCAATGGCATGGATTGGGACAGTCAAATTGTGGACCATGAAGATGGGCCTCTTGAAAGGGAGAAACTTTTATTTGCTGTGAAGAATTATTGGACAGCTCCAGCCGCTTCCGACAAGAATAGTTAA 1896 0.4826 MLNADSTSPYHPTAKPSKPTSTFFKKTNLYTLLAFLCIVSYLLGAYQGTTTKTTITTTTTPCPQNPTLTTTTHLLDFSSHHNSTNLNPSTSTTLHFPPCHVSLSEYTPCEDHARSLQYSRRRMVYRERHCPRNNEVLKCRVPAPHGYRNPFPWPASRDVAWYANVPHRELTVEKAVQNWIRYDGDRFHFPGGGTMFPDGADKYIDDIADLVNLRDGTVRTAVDTGCGVASWGAYLLSRDIITVSIAPRDTHEAQVQFALERGVPALIGVLASKRLPFPSRAFDMAHCSRCLIPWAEYDGLYLNEIDRILRPGGYWILSGPPIRWKKHWKGWERTKEDLNKEQTKIENAAKSLCWNKLVEKDDIAIWQKAKNHLDCKSNRKLTQNRPFCKAQNNPDKAWYTDMQACLSPMPEVFSKEETAGGALKKWPERLKATPPRISRGTIKGVNPETFSKDNELWKKRVAYYKKANNQLGKAGRYRNLLDMNAYLGGFAAALVDLPVWVMNVVPVQAKVDTLGAIYERGLIGTYHNWCEAMSTYPRTYDLIHADSLFSLYNDRCELEDILLEMDRILRPEGSVIIRDDVDILVKVKSIVNGMDWDSQIVDHEDGPLEREKLLFAVKNYWTAPAASDKNS* 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1579 631 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 468 581 IPR029063 -
Gso16g1579 631 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 19 625 IPR004159 GO:0008168
Gso16g1579 631 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 127 320 IPR029063 -
Gso16g1579 631 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 105 618 IPR004159 GO:0008168
Gso16g1579 631 Gene3D Vaccinia Virus protein VP39 171 380 IPR029063 -
Gso16g1579 631 PANTHER METHYLTRANSFERASE PMT20-RELATED 19 625 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1579 Gso-Chr16 36325864 36332526 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1579 - - gmx:100814235 1252.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1579 16 36325864 36332526 Gso16g1579 16 36325864 36332526 ECH