Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1574 ATGCGAGTCTTAGCCTCTCGAACCTCCAATCTCTTCAAGCTCAATGTCGAGCACTTTCTACTAATCCACAACCCTAATTTCAACTCCGTCAGAGAATTCTCGCAATCCACCGCAATCCCCAAAAAGCAACTTAGGGTTCGCGACCATGGCTATGACAACTACATGGAAGTCGAGAAGAAAACGCGCAAGGTCCTAAAATTCCAGAACCTCATCCTCTCGGAACCTTCCCAATCGCTCCCAATCTCGCGCCTTGAGACGCTCGCGCGGCGCTTCGGCTTCACGCGCCACGAGTCCGGCGCGTTCGTCCTCAAGTTCCCGCACGTGTTCGAAATCTTCGAGCACCCTGTGCAGCGCATCCTTTTCTGCCGCCTCACCCGCAAGGCCATCCTCCAGATCGAGCAGGAGCGTCGTGCACTAGCCGCGGAGCTCCCACGCGCTGTCACGCGCCTCCGGAAGCTCCTCATGATGTCGAACCATGGCCGCCTCCGCCTCGAGCACGTGCGCATCGCACGCGCCGCGTATGGGCTCCCGGACGACTTTGAAAACTCGGTGGTGCTGAGGTACCCTCAGTTTTTCCGTTTGATTGATGCTAAGGAAACTAGGAACAAGTACATTGAGGTTGTGGAGAGAGACCCTGGGTTAGGAACTTGTGCAATTGAGGAAGCTAGGGAAAGGGTTTATAGAGAGAGAGGAAGTGATGCTGAGGATATTAGGTTTTCTTTTGTGATTGATTTTCCACCTGGTTTTAAGATTGGTAAGTATTTTAGGATTGCAATGTGGAAGTGGCAGAGGCTTCCTTATTGGTCCCCTTATGAGGATGTTTCCGGGTATGATTTGAGGTCCATTGAGGCCCAGAAGAGGATGGAGAAGAGGGCTGTTGCCACCATTCACGAGTTGTTGTCCTTGACTGTGGAGAAGAAGATTACGCTGGAGAGGATTGCGCATTTCCGGATGGCCATGAACCTGCCCAAGAAGTTGAAGGATTTTTTGCTGCAGCACCAGGGGATTTTTTATGTCTCCACAAGGGGGAATCAGGGAAAGCTTCACACTGTTTTCCTTAGGGAGGCATATAGGAAGGGCGAGCTGATCGAGCCGAATGAGTTGTATTTGGCGCGGAGGAAGCTGGCCGAGCTTGTCCTGTTGAGCCCTCGGAAGGCTAAGGTTGATGGGGAGTTGGTTGGGTATAGGAGAAGCAGGTTAGAGGATGAAATGGGGCAGGTAACTAGAGCATATGTGGAGGATGCTTGTGAAGACTTTAAGGGCAAAGATGATTCGGGGCGGGATAAGGATGCAGAGGATGATTTGACATCAGATATAGGCTCCGATGTTGATTTGGGAGATGAGGATGATGATTGTGTGGATAATGTGTCGTTGCAGAGGAAATCTTAG 1389 0.514 MRVLASRTSNLFKLNVEHFLLIHNPNFNSVREFSQSTAIPKKQLRVRDHGYDNYMEVEKKTRKVLKFQNLILSEPSQSLPISRLETLARRFGFTRHESGAFVLKFPHVFEIFEHPVQRILFCRLTRKAILQIEQERRALAAELPRAVTRLRKLLMMSNHGRLRLEHVRIARAAYGLPDDFENSVVLRYPQFFRLIDAKETRNKYIEVVERDPGLGTCAIEEARERVYRERGSDAEDIRFSFVIDFPPGFKIGKYFRIAMWKWQRLPYWSPYEDVSGYDLRSIEAQKRMEKRAVATIHELLSLTVEKKITLERIAHFRMAMNLPKKLKDFLLQHQGIFYVSTRGNQGKLHTVFLREAYRKGELIEPNELYLARRKLAELVLLSPRKAKVDGELVGYRRSRLEDEMGQVTRAYVEDACEDFKGKDDSGRDKDAEDDLTSDIGSDVDLGDEDDDCVDNVSLQRKS* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1574 462 MobiDBLite consensus disorder prediction 420 436 - -
Gso16g1574 462 MobiDBLite consensus disorder prediction 420 462 - -
Gso16g1574 462 MobiDBLite consensus disorder prediction 437 452 - -
Gso16g1574 462 PANTHER PROTEIN ROOT PRIMORDIUM DEFECTIVE 1 23 442 IPR040295 -
Gso16g1574 462 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 23 442 IPR045040 GO:0003723
Gso16g1574 462 Pfam Plant organelle RNA recognition domain 46 382 IPR021099 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1574 Gso-Chr16 36279774 36283094 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1574 - - gmx:100782167 883.634
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1574 16 36279774 36283094 Gso16g1574 16 36279774 36283094 ECH