Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1558 ATGCAGATTCGAGTTCGTTGCAACTGTGGAGAAGGAAACTGCGAGGAATGGGGCGTCATAGAACTACAAGGAGTGGTGGAGCCACAGCCTGGATTCCACGATTCCCTCCCAAACCTTCAAATCGGCACTCTCTGTCGTCCTTCTTCTCAGGAAGTCTACACCTTCACTGTTGGATACCATGAACTGACAGGGTCAAAGGTTCCCTTGAAGAAGCCAATGGTGGTGCTCAAGAAAGTAAAGCATCCTGATGGAGAAAGTGGTTGTAAGGTGGAGCTGCAAGTTGTTGGAGTCATTAGACATAAGATTCTGTTCAAGAACAGACCAAAGGCTCTCATTTCTAAGCCACAGATAACATCCAGGGAAAGACAAAAGCCTATCATGTTAGGGTCTTCTCCTTCAAATCAAACAGCTTAA 414 0.4614 MQIRVRCNCGEGNCEEWGVIELQGVVEPQPGFHDSLPNLQIGTLCRPSSQEVYTFTVGYHELTGSKVPLKKPMVVLKKVKHPDGESGCKVELQVVGVIRHKILFKNRPKALISKPQITSRERQKPIMLGSSPSNQTA* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1558 137 PANTHER CHROMOSOME TRANSMISSION FIDELITY PROTEIN 8 1 125 - -
Gso16g1558 137 MobiDBLite consensus disorder prediction 114 137 - -
Gso16g1558 137 Pfam Ctf8 49 109 IPR018607 GO:0007064|GO:0031390
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1558 Gso-Chr16 36147320 36151632 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1558 K11270 - gmx:100807992 270.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1558 16 36147320 36151632 Gso16g1558 16 36147320 36151632 ECH
Gso16g1558 16 36147320 36151632 Gso9g1162 9 33283392 33288194 GST