Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1556 ATGGCTTTGCAACTATGGGAGACACTGAAGGAGGCCATAGAAGCGTACACGGGGCTCTCTCCGAACACCTTCTTCACCCTGCTGGCCCTCATCCTGGCCCTCTACTACGTCGTTTCGGGCCTCTTCCCCTCCTCCTCCGACCACCGCCACAACACCGCCTCGCGTGACTTCGAGCCCCAGATGGAGCCTCTGCGACCCCCTGTTCAAATCGGCGAGGTCACCGAGGAAGAACTCAAGGCCTACGACGGCTCCGATCCCGAGAAGCCTCTCCTCATGGCCATCAAGGGCCAGATCTATGATGTTTCCCAGAGCAGAATGTTTTATGGACCTGGTGGACCCTATGCTCTATTTGCTGGCAAGGATGCTAGCAGAGCTTTAGCAAAGATGTCTTTTGAAGAGAAAGATCTAACTGGAGATATCTCTGGTCTTGGCCCATTTGAGGTTGAGGCCTTGCAAGACTGGGAATACAAGTTTATGGGCAAGTATGTAAAAGTTGGAACTGTCAAAAAGACCGTTCCAGTAACTGAACCAGAATCCACTGGCGAAGCAGCAGAATCTAATGTCCATGATGCTGAATCTTCAAAGCCTACTGAAGATGATGGCCCATCAGAATCAGCAGCTGCTAAAAATGATGGAACCCCTTCAAAGATTGACGCAGATAAAGAGTAA 669 0.5097 MALQLWETLKEAIEAYTGLSPNTFFTLLALILALYYVVSGLFPSSSDHRHNTASRDFEPQMEPLRPPVQIGEVTEEELKAYDGSDPEKPLLMAIKGQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFEVEALQDWEYKFMGKYVKVGTVKKTVPVTEPESTGEAAESNVHDAESSKPTEDDGPSESAAAKNDGTPSKIDADKE* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1556 222 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 66 169 IPR036400 -
Gso16g1556 222 MobiDBLite consensus disorder prediction 183 205 - -
Gso16g1556 222 Gene3D - 71 169 IPR036400 -
Gso16g1556 222 MobiDBLite consensus disorder prediction 173 222 - -
Gso16g1556 222 PANTHER CYTOCHROME B5-LIKE HEME/STEROID-BINDING DOMAIN PROTEIN 1 217 - -
Gso16g1556 222 PANTHER MEMBRANE-ASSOCIATED PROGESTERONE RECEPTOR COMPONENT-RELATED 1 217 - -
Gso16g1556 222 Pfam Cytochrome b5-like Heme/Steroid binding domain 74 168 IPR001199 -
Gso16g1556 222 SMART Cyt_b5_2 73 169 IPR001199 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1556 Gso-Chr16 36116503 36120174 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1556 K17278 - gmx:100807452 416.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1556 16 36116503 36120174 Gso16g1556 16 36116503 36120174 ECH
Gso16g1556 16 36116503 36120174 Gso9g1158 9 33120576 33124437 GST
Gso16g1556 16 36116503 36120174 Gso20g1262 20 42692201 42695008 PCT
Gso16g1556 16 36116503 36120174 Gso10g2114 10 48133626 48136467 PCT
Gso20g1262 20 42692201 42695008 Gso16g1556 16 36116503 36120174 PCT
Gso10g2114 10 48133626 48136467 Gso16g1556 16 36116503 36120174 PCT