Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1523 ATGAGAGAGAATAACAACGAGGTTGTAATCACGGCGGGGGAAGAAGAGAATCACGTATCGGGAGGGCATCTTCGTCATTCCAGGGACGGAATCTGGTGGTCAGTTGCGAAATCATTGCCACGATCCACGGCGGTTCTCATCTTCCCCGTCATGCTCATCATCGGCGCGTTGACTTACACGCGCACGCTAGACACACATCCTCTCTTTTCCGGAGCTTCATCTACAAAATCAGCACTAAGCACCACACCATACAACACTGGTCCATTCACAGTCTCCATCCGGAAGCCTATAGAGATCCCATTGAACTGCACTGCCTACAACCTCACCAGAACATGCTCCACCAACCAATTCCCAATCCCAGAAAACGATCAGAGCCATCCATCCAGTGCCACGTGTCCAGAGTACTTCCGTTGGATCCACGAGGATTTGAGGCCATGGGCCCGCACAGGCATAACGCAAGACATGGTGGAGAGGGCAAAGGAAACAGCAAATTTCAAGTTGGTGATATTGAAGGGTAAGGCCTATTTGGAGACTTACGAAAAGGCCTATCAAACAAGGGATGTTTTTAGCATATGGGGGATTCTACAATTGTTGAGAAGGTACCCTGGCAAGATACCTGATTTGGAGCTTATGTTTGATTGTGTGGATTGGCCTGTGGTTTTGGCTGATCGTTACAATGGCCCTAATGTTGAACAACCACCACCCTTGTTTCGCTATTGTGGGAATGATGCTACTTTGGATATTGTCTTTCCTGATTGGTCCTTCTGGGGATGGGCTGAGGTTAACATAAAGCCATGGGAGATTTTGTTGACAGAGTTGAAAGAAGGAACCAAGAGGATACCATGGCTGAACAGAGAGCCTTATGCATACTGGAAAGGTAATCCAGTTGTTGCTGAAACCAGACAAGATCTCATGAAATGCAATGTTTCTGAAAATCAAGATTGGAATGCTCGTTTATATGTTCAGGATTGGGGACGAGAATCACAAGAGGGGTACAAGAACTCAGACTTGGCAAGTCAATGCACTCACAGATATAAGGTGTACATTGAAGGTTCTGCTTGGTCCGTGAGTGAAAAATACATTCTGGCATGTGACTCTCCCACCCTACTTGTAAAACCCCATTACTATGATTTTTTCACAAGAGGACTAATTCCGGTGCACCACTATTGGCCCATAAAGGAAGATGACAAGTGCAGGTCCATTAAGTTTGCTGTGGATTGGGGCAATAGTCACAAACAAAGGGCACATCAAATTGGCAAGGCTGCAAGTGATTTCATTCAAGAAGAGTTAAAGATGGACTATGTGTACGACTACATGTTTCATCTCCTGAATTCATATGCTAAACTCTTTAGATACAAACCCTCTATAAGTGCTAATGCTACTGAAATATGTGTGGAGTCAATGGTTTGTGGAGCAGAAGGACCAGTAAAGAAATTTATGATGGAATCATTGGTCAAGGTTCCTGCAAATACCGACCCTTGCACCATGCCTGCCCCTTTCGATCCTCCATCTTTGAACGCTCAATTACAGAGAAAGGAAAGTTCAATTCAACAAGTTGATTCATGGGAGAAAAGTTACTGGGAGAACCAAACCATAACATCTTAG 1605 0.4492 MRENNNEVVITAGEEENHVSGGHLRHSRDGIWWSVAKSLPRSTAVLIFPVMLIIGALTYTRTLDTHPLFSGASSTKSALSTTPYNTGPFTVSIRKPIEIPLNCTAYNLTRTCSTNQFPIPENDQSHPSSATCPEYFRWIHEDLRPWARTGITQDMVERAKETANFKLVILKGKAYLETYEKAYQTRDVFSIWGILQLLRRYPGKIPDLELMFDCVDWPVVLADRYNGPNVEQPPPLFRYCGNDATLDIVFPDWSFWGWAEVNIKPWEILLTELKEGTKRIPWLNREPYAYWKGNPVVAETRQDLMKCNVSENQDWNARLYVQDWGRESQEGYKNSDLASQCTHRYKVYIEGSAWSVSEKYILACDSPTLLVKPHYYDFFTRGLIPVHHYWPIKEDDKCRSIKFAVDWGNSHKQRAHQIGKAASDFIQEELKMDYVYDYMFHLLNSYAKLFRYKPSISANATEICVESMVCGAEGPVKKFMMESLVKVPANTDPCTMPAPFDPPSLNAQLQRKESSIQQVDSWEKSYWENQTITS* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1523 534 Pfam Glycosyl transferase family 90 129 523 IPR006598 -
Gso16g1523 534 SMART cap10 204 453 IPR006598 -
Gso16g1523 534 PANTHER KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED 41 532 - -
Gso16g1523 534 PANTHER MOTIF-CONTAINING PROTEIN 1, PUTATIVE-RELATED 41 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1523 Gso-Chr16 35571909 35578969 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1523 - - gmx:100800365 1127.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1523 16 35571909 35578969 Gso16g1523 16 35571909 35578969 ECH
Gso16g1523 16 35571909 35578969 Gso9g1140 9 32699364 32711501 GST