Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1504 ATGCCTTGCTCTTCCCTCACTTCCACTGGCGATAACAGCAGCAGCAGCAGCAACAAGAAGAAGGATGGTTCTTCTCTCCGCGAGTTCAAGCTGAACGAATCAACCTTCTTAGCTTCGCTCATGCCTAAGAAAGAGATTGGCGTCGATCGCTTCTTCGACGCTCATCCCGAATACGACGGTCGCGGCGCTCTCATCGCTATCTTCGATTCTGGTGTAGACCCCGCTGCTGATGGATTACAGATTACCTCAGATGGGAAACCAAAAGTTCTCGATGTCATTGATTGCACAGGGAGTGGTGATATTGATACCTCAAAGGTGGTGAAGGCCGATTCTGATGGTCGTATTTGTGGTGCATCAGGGGCATCACTGGTTATCAATACTTCGTGGAAAAATCCTTCTGGTGAATGGCGTGTTGGTTATAAATTAGTTTATGAGCTATTCACCGAAGGTGTGATATCTCGTTTGAAGAAAGAAAGAAAAAAAAAGTGGGATGAGAAAAACCAGGAGGAAATTGCTAGGGCTGTAAAACAACTTGCTGACTTTGATCAGCAACAAATCAAGGTAGAGGATGTAAAACTTAAAATGTTCCGGGAAGATCTCCAGAATAGACTTGATATTTTGAGAAGGCAATCTGAGAGCTATGATGATAAAGGGCCTGTCATAGATGCTGTTGTCTGGCATGATGGAGAGGTTTGGAGGGCTGCCCTTGACACACAGAGTCTGGAAGATGATCCAAATTGTGGGAAGCTTGCTAATTTTATGCCTTTAACTAATTATAGGAAAGAGAGGAAGTATGGCATCTTCAGCAAATTAGATGCTTGTACTTTTGTTGTTAATGTCTTCAGTGATGGGAATGTCTTAAGTATTGTAACAGACTGTTCTGCACATGCCACCCATGTTGCTGGTATAGCTACTGCTTTCCACCCAAAGGAGCCCTTGTTGAATGGAGTTGCACCTGGCGCACAAATAATATCTTGTAAAATTGGGGATTCTCGCTTAGGTTCAATGGAAACAGGAACGGGTTTGATTCGGGCACTCATAGCAGCTGTGGAGCATAAGTGTGACCTTATCAACATGAGTTATGGCGAAGCAACATTACTGCCAGACTATGGGCGCTTTGTTGATCTTGTGAATGAGGTGGTGAACAAACATCGTCTGATATTTGTGAGCAGTGCTGGTAATAGCGGGCCAGGATTGAGCACTGTTGGTGCACCTGGTGGTACATCTTCCAGTATCATAGGTATTGGCGCATATGTATCTCCTGCTATGGCTGCTGGTGCTCATTGTGTTGTTGAACCTCCATCTGATGGGCTTGAATACACTTGGTCTAGCCGGGGACCAACAGCTGATGGAGACCTTGGTGTTTGTGTGAGTGCTCCTGGTGGTGCTGTTGCTCCTGTCCCCACATGGACTCTTCAACGACGTATGCTCATGAATGGGACATCAATGGCATCACCATCAGCTTGTGGAGGAACTGCGTTGCTCATAAGTGCAATGAAGGCTGAGGGAATCACTGTGAGTCCATACAGTGTGAGGAAGGCGCTTGAAAATACCGCAATTCCCATAGGTGATTTACCTGAGGATAAATTATCCACTGGACAAGGGCTTATGCAAGTTGACAAGGCTTTTGAATATATACAGAAGTGCCAAAATGTTCCATGTGTTTGGTATCAAATAAAAATCCAGCAATGCGGAAAAACAAGTCCTTCATCAAGGGGCATCTACCTTAGGGAAGCTAGTGCTTGCCAACAATCTACGGAGTGGACAGTGCAAGTTAATCCAAATTTTCATGAAGATGCTGACAACTTCAAGGATTTGGTTCCATTTGAGGAGTGCATTGAATTACATTCTACAGAAGAAACAGTTGTCAAGGCCCCTGACTATCTACTGCTCACTTATAATGGTCGCACCTTCAATGTAGTGGTGGATCCTTCCAATCTTTCTGATGGTCTTCATTATTTTGAGGTCTATGGTATTGACTGCAAAGCTCCATGGCGTGGTCCTCTGTTCAGAATTCCAATCACCATAACAAAGCCCAAGGCCATAACTAACCAGCCTCCACAAATTTCATTTTCAAAGATGTTGTTCCAGCCAGGCCATATAGAAAGGAGATACATAGAAGTGCCGCATGGTGCATCTTGGGCCGAAGTAACGATGAAAACATCAGGTTTTGACACAGCACGGAGATTTTATGTGGATGCTGTTCAGCTGTGCCCACTGCGAAGACCTTTGAAATGGGAGAGTTCTGTAAATTTTCCTTCTCCTGCTGCCAAAAGCTTTGCCTTTAGGGTAGTAAGCGGCCAGACATTGGAACTAGTCATTTCTCAGTTTTGGTCAAGCGGCATAGGGAGTCATGAGACCGCGAGTGTGGATTTTGAGGTTGTGTTTCACGGGATAAAGGTCAATCAAGAAGAGGTTTTACTTGATGGTAGTGACGCACCAGTCAGGATTGATGCTGAAACTCTACTGGCATCTGAGGAACTTGCACCTGTGGCAATTCTAAACAAGATTAGGGTCCCATATCGACCAATAGATTCTAAGATTATTGCACTTACAGCAGATCGTGACAAACTTCCTTCTGGAAAACAGATTCTGGCACTGACTCTGACCTACAAGATCAAATTGGAAGATGGAGCTCAAATAAAACCTCACATACCTTTGCTAAATGACCGGATATATGACACTAAATTTGAGTCTCAATTTTATATGATTTCTGACTCAAATAAGCGCGTATATTCAAGTGGAGATGTCTATCCAAGCTCTTCTAATCTTCCCAAAGGAGAATATATTTTACAGTTATATTTGAGGCATGACAATGTGCAGATTTTGGAAAAGATGAGGCATTTGGTGTTATTCATTGAGCGAAATTTGGAAGAGAAGGATGTCATTCGGCTAAGCTTTTTCTCTCAACCCGATGGCCCGCTGATGGGAAATGGTTCCTTTAAGTCCTCATCACTAGTTCCAGGTATAAAAGAAGGAATATATCTCGGTCCACCACCAAAAGAAAAGCTTCCCAAGAATTCTCCACAAGGATCTGTTTTGCTAGGGGCAATTTCATATGGGAAGCTGTCCTTTGTTGGTCAGGGAGAGAATAAAAGTCCCGAAAAGCACCCTGCATCATATCAGATTTCTTATATAGTTCCCCCAAATAAGATTGATGAGGACAAGGGAAAAGGTTCTTCCTTATCTTCCAAGAAGAATGTTTCAGAACGTTTAAAAGAAGAGGTAAGAGATGCAAAAATAAAAGTTCTAGCAAGCCTAAAACAAGAAACTGATGAAGAGCGTTTGGAGTGGAAAGAGCTATCTGCCTTGCTTAAATCAGAATATCCAAAGTACACTCCATTACTTGCAACGATTTTGGAAGGTTTAGTTTCTTGGAGTAATATCAAAGACAAAATCCATCATGATGAAGAGGTGGTTGGTGCAGCCAGTGAGGTGATTAACAGTATTGACAGAGAAGAGCTAGCAAAATTTTTTGCTCTAAAAAATGATCCAGAAGATGAGGAAGCGGAGAATATCAGGAAAAAGATGGAGTTAACCCGAGACCAATTGGCAGATGCACTGTACCAAAAGGGGCTTGCGCTGGCAGAGATTGAGTCTTTAAAGTTGGCAGACTTGACTTGGTGTATATTGTCAAAGGACGTAGATAAGTCCCCGACTTTGGCTGCCACAGAAGGGGCAAAAGAAGACATAGAAAATAAAAAATCTACGGATGGTCGCAGTCAAGGAGATTTGTTTGAAGAGAATTTTAAAGAACTGAAGAAATGGGTTAATGTGAAGTCAACTAAATATGGGATCCTTTTAGTAACTCGTGAGAGGCGAGCTCAAAGGCTTGGGACTGCGTTGAAGGTACTGTGTGACATAATTCAAGATGACGCAGAGCCTGCCAAGAAGAAATTCTATGACCTTAAGCTCTCTTTGCTTGATGAGATTGGATGGACACATTTGGCTGCATATGAGAGACAATGGATGCATGTGCGTTTCCCTCCAAGCTTACCTCTTTTCTAG 4008 0.4311 MPCSSLTSTGDNSSSSSNKKKDGSSLREFKLNESTFLASLMPKKEIGVDRFFDAHPEYDGRGALIAIFDSGVDPAADGLQITSDGKPKVLDVIDCTGSGDIDTSKVVKADSDGRICGASGASLVINTSWKNPSGEWRVGYKLVYELFTEGVISRLKKERKKKWDEKNQEEIARAVKQLADFDQQQIKVEDVKLKMFREDLQNRLDILRRQSESYDDKGPVIDAVVWHDGEVWRAALDTQSLEDDPNCGKLANFMPLTNYRKERKYGIFSKLDACTFVVNVFSDGNVLSIVTDCSAHATHVAGIATAFHPKEPLLNGVAPGAQIISCKIGDSRLGSMETGTGLIRALIAAVEHKCDLINMSYGEATLLPDYGRFVDLVNEVVNKHRLIFVSSAGNSGPGLSTVGAPGGTSSSIIGIGAYVSPAMAAGAHCVVEPPSDGLEYTWSSRGPTADGDLGVCVSAPGGAVAPVPTWTLQRRMLMNGTSMASPSACGGTALLISAMKAEGITVSPYSVRKALENTAIPIGDLPEDKLSTGQGLMQVDKAFEYIQKCQNVPCVWYQIKIQQCGKTSPSSRGIYLREASACQQSTEWTVQVNPNFHEDADNFKDLVPFEECIELHSTEETVVKAPDYLLLTYNGRTFNVVVDPSNLSDGLHYFEVYGIDCKAPWRGPLFRIPITITKPKAITNQPPQISFSKMLFQPGHIERRYIEVPHGASWAEVTMKTSGFDTARRFYVDAVQLCPLRRPLKWESSVNFPSPAAKSFAFRVVSGQTLELVISQFWSSGIGSHETASVDFEVVFHGIKVNQEEVLLDGSDAPVRIDAETLLASEELAPVAILNKIRVPYRPIDSKIIALTADRDKLPSGKQILALTLTYKIKLEDGAQIKPHIPLLNDRIYDTKFESQFYMISDSNKRVYSSGDVYPSSSNLPKGEYILQLYLRHDNVQILEKMRHLVLFIERNLEEKDVIRLSFFSQPDGPLMGNGSFKSSSLVPGIKEGIYLGPPPKEKLPKNSPQGSVLLGAISYGKLSFVGQGENKSPEKHPASYQISYIVPPNKIDEDKGKGSSLSSKKNVSERLKEEVRDAKIKVLASLKQETDEERLEWKELSALLKSEYPKYTPLLATILEGLVSWSNIKDKIHHDEEVVGAASEVINSIDREELAKFFALKNDPEDEEAENIRKKMELTRDQLADALYQKGLALAEIESLKLADLTWCILSKDVDKSPTLAATEGAKEDIENKKSTDGRSQGDLFEENFKELKKWVNVKSTKYGILLVTRERRAQRLGTALKVLCDIIQDDAEPAKKKFYDLKLSLLDEIGWTHLAAYERQWMHVRFPPSLPLF* 1336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1504 1335 PRINTS Subtilisin serine protease family (S8) signature 60 79 IPR015500 -
Gso16g1504 1335 PRINTS Subtilisin serine protease family (S8) signature 292 305 IPR015500 -
Gso16g1504 1335 PRINTS Subtilisin serine protease family (S8) signature 479 495 IPR015500 -
Gso16g1504 1335 MobiDBLite consensus disorder prediction 1 25 - -
Gso16g1504 1335 MobiDBLite consensus disorder prediction 1 20 - -
Gso16g1504 1335 Gene3D - 557 690 - -
Gso16g1504 1335 SUPERFAMILY Subtilisin-like 40 553 IPR036852 GO:0004252|GO:0006508
Gso16g1504 1335 Coils Coil 1062 1082 - -
Gso16g1504 1335 Gene3D Peptidase S8/S53 domain 219 554 IPR036852 GO:0004252|GO:0006508
Gso16g1504 1335 Gene3D Peptidase S8/S53 domain 43 133 IPR036852 GO:0004252|GO:0006508
Gso16g1504 1335 Pfam Tripeptidyl peptidase II 823 1007 IPR022229 -
Gso16g1504 1335 CDD Peptidases_S8_Tripeptidyl_Aminopeptidase_II 40 522 IPR034051 GO:0006508|GO:0008240
Gso16g1504 1335 PANTHER TRIPEPTIDYL PEPTIDASE II 12 1219 - -
Gso16g1504 1335 ProSitePatterns Serine proteases, subtilase family, serine active site. 480 490 IPR023828 -
Gso16g1504 1335 Coils Coil 197 217 - -
Gso16g1504 1335 Gene3D - 158 216 - -
Gso16g1504 1335 Pfam Subtilase family 60 523 IPR000209 GO:0006508|GO:0008236
Gso16g1504 1335 ProSiteProfiles Serine proteases, subtilase domain profile. 45 543 - -
Gso16g1504 1335 Gene3D - 1066 1335 - -
Gso16g1504 1335 PANTHER PEPTIDASE S8 12 1219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1504 Gso-Chr16 35272714 35292970 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1504 K01280 - gmx:100798235 2570.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1504 16 35272714 35292970 Gso9g1126 9 32321256 32346806 GST
Gso16g1504 16 35272714 35292970 Gso20g1283 20 42890961 42895720 PCT
Gso16g1504 16 35272714 35292970 Gso10g2095 10 47913312 47933399 PCT
Gso20g1283 20 42890961 42895720 Gso16g1504 16 35272714 35292970 PCT
Gso10g2095 10 47913312 47933399 Gso16g1504 16 35272714 35292970 PCT