Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1501 ATGGCTTCCCTCACGTGCTCCCCCACCTCGCTACAGCTCCGATTGGCCTTAGCCGCCCCTAAATTCCCACACACCCCGCAACTGCGAATGCGCGACTTCAAGCTCAACCGAGTTCGCCCTCTACGCGCCGCGCAAGACGGCGGGCCCGGGCCCGGGCCCAAACTCGACGGCTTCTCGGGCTGGTCCGACACCGACGCCGAGCAGCGGCCCAACAACGCCCCAAAGAAGGAGTCATATGGAGGAGTTGTGGGAGTAGGAGTGGCTGGAGTGCTTCTACTTTCAGGGCTTACCTTTGCTGCCTTATCTCTTGGCAAACAAACTGGTTCCAGACCTGAGCAACACATGAAGCCCTTGACTTCACAGCAGGAGGAACTTTTGTCTTCTGATGACCATAATGATGAAATAACTGAACAAGGGAATGTTGACAACACGGTCGAACAAGGAAATGGTAAAATGGAAGGTCAGATACATATATCTGGGGATTATTCTTCTGCTGAGTCTAGTAATTTTTACAGTGACAATAGCATTGTTGATGATTCTGACATAGGATCCCAGTTGATATATGATAGCAAAAACCCCTCCGATGGTGTTGACGATGCCACTAAACATATATCTGTTCAAGAAGATTTACAGGATGTGTCAGCTTTTGATAACAAGTTAGTTTTTGCTAGTGAAAGCCCAGTGCCACTTGAATCTGAAAATACTGTCGATTCTTTTAATGCTTATGGATTTAGAGATTTTGATAGCAACCCTAATGTAGATACAGTGGAATCTACTCCCAATCTTAAAGAAAACCTATTCAATGTTGATCCAGGAGACATGCCCAACTATGATGATGCTAAGCCATTACACCTTAATACTGAGCAACATGATGAAATAACCAGTTCAAGTGGAAGTGTAAGTTTTGGTTTTCCTGAAACCTATTCTAGTTCGGGTGCTGATAATGAGACTGGAATTGTTAGTGTTGTGGTCATTTCTGAGCTAAATAACATGATTTCAGATCCTAAGTTTTTCAATGAAGCTGGTCAAGAGAATATTCTGTCAGCTTTAAAGAATGAAAACCTTGACCTGAACAAAATTCCACAGGTCTCCGCTGAGGGAAATGAGCCTTCCTTTGAAGAGCGGAGCATTCCTGGAAATGACCTGTTTGAAAAATCATCTATTTCAACATCAGCCAATACATTGGTAGATGAGCAGGTTAGAAATGATAATTATGAGGTTGATGAAGTTAAATCTGAATCTTCAAATTCTGGATCCTTTTTCTCTGTTCCCGGCATTCCCGCTCCATTAGTAGTTTCTACAGCTGTACAAGTGCTTCCGGGAAAGATTTTGGTTCCTGCAGCTGTTGATCAAGTTCAGGGCCAAGCACTAGCTGCATTGCAAGTTTTAAAGGTCATTGAGCCTGATGTTCAACCTAGTGATTTATGTACACGTCGTGAATATGCTCGCTGGTTGGTTTCTGCTAGCAGTGCTCTTTCAAGGAGCACAGTTTCAAAAGTGTATCCTGCCATGTACATAGACAATGCTACTGAGCTTGCATTTGATGATGTCACTCCCGAGGACCCTGATTTTTCTTCCATTCAAGGCTTGGCAGAAGCTGGACTTATTGAAAGCAGGCTTTCAAGACGTGATATACAGTTGTTTGGTGATGGAGATGATAGCCCATTTCACTTCTCCCCTGAAAGTCCTTTATCACGTCAAGATCTTGTCAGCTGGAAAATGGCCCTGCAGAAAAGACAGCTTCCGGAAGCTGACAGAAAGGTGCTGTATCAACTTTCTGGTTTTATAGACACTGATAAGATACATCCTAATGCATGCCCTGCCTTAGTAGCTGATCTGTCTGCTGGGGAGCAGGGAATAATAGCTCTTGCATTTGGTTATACAAGATTGTTCCAGCCAGATAAACCAGTAACAAAAGCCCAAGCAGCTATGGCTCTTGCTACTGGAGATGCTTCTGAAATAGTTAGTGAAGAGCTTGCACGCATTGAAGCAGAATCTATTGCTGAAAATGCTGTTGCTGCGCATAGTGCTTTAGTAGCTCAAGTAGAGAAGGATATCAATGCAAGTTTTGAGCAGGAGCTTTTCATAGAGAGGGAAAAGATCAGTGCTGTTGAAAGAATGGCTGAGGAGGCAAGACTTGAGTTGGAAAGGTTAAGAGCTGAGAGAGAAGAAGATAACCTTGCATTGACTAAGGAGCGAGCTGCTATTGAATCGGAAATGGAGGTTTTTTCAAAGTTAAGGCATGAGGTTGAGGATCAATTACAAAGCCTAATGAGTGACAAGGTAGAAATAGCGCATGAAAAAGAGAGGATTAGCAAGCTTCGGGAAAAAGTAGAAGTTGAAAACAATGAGATTGGCCGTTTACAATATGAGCTAGAGGTTGAAAGAAAAGCCCTGTCCATGGCCAGGGCTTGGGCAGAGGACGAGGCCAAACGAGTGAGAGAGCAAGCAATAGCCTTAGAGGAGGCTAGAGATCGTTGGGAGAGGCATGGAATCAAAGTGGTAGTTGATGATGACCTCCGCAAGGAGGCCTCGGCTGGAGTGACATGGCTCAATGCCTCAGAGCAGGTGTCGGTTCAAGGAACAGTTGACAGGGCAGAGAGCTTATTGGACAAGCTCAAACAAATGGCTGCAGATATCAGAGGAAAATCTAGAGATACCCTTCACAAAATCATTCACGTGGTTTCCCAATTTATATCAAAATTGAGGGAATGGGCATGCAAAACAGGAAAACTGGCTGAAGAATTTGGAGAAGCTGCCATCTCAAAGGTAGGCAAGTCAGTCAGTGAGTTGCAGCAAAATGCTCTTGAAGTTGGAATTGGTATCAAAGAAGGTGCAAAGCGAGTTGCTGGTGATTGTAGAGAAGGGGTTGAGAAAATCACCCAAAAATTCACACAGAAGTTCAAGACCTGA 2913 0.4428 MASLTCSPTSLQLRLALAAPKFPHTPQLRMRDFKLNRVRPLRAAQDGGPGPGPKLDGFSGWSDTDAEQRPNNAPKKESYGGVVGVGVAGVLLLSGLTFAALSLGKQTGSRPEQHMKPLTSQQEELLSSDDHNDEITEQGNVDNTVEQGNGKMEGQIHISGDYSSAESSNFYSDNSIVDDSDIGSQLIYDSKNPSDGVDDATKHISVQEDLQDVSAFDNKLVFASESPVPLESENTVDSFNAYGFRDFDSNPNVDTVESTPNLKENLFNVDPGDMPNYDDAKPLHLNTEQHDEITSSSGSVSFGFPETYSSSGADNETGIVSVVVISELNNMISDPKFFNEAGQENILSALKNENLDLNKIPQVSAEGNEPSFEERSIPGNDLFEKSSISTSANTLVDEQVRNDNYEVDEVKSESSNSGSFFSVPGIPAPLVVSTAVQVLPGKILVPAAVDQVQGQALAALQVLKVIEPDVQPSDLCTRREYARWLVSASSALSRSTVSKVYPAMYIDNATELAFDDVTPEDPDFSSIQGLAEAGLIESRLSRRDIQLFGDGDDSPFHFSPESPLSRQDLVSWKMALQKRQLPEADRKVLYQLSGFIDTDKIHPNACPALVADLSAGEQGIIALAFGYTRLFQPDKPVTKAQAAMALATGDASEIVSEELARIEAESIAENAVAAHSALVAQVEKDINASFEQELFIEREKISAVERMAEEARLELERLRAEREEDNLALTKERAAIESEMEVFSKLRHEVEDQLQSLMSDKVEIAHEKERISKLREKVEVENNEIGRLQYELEVERKALSMARAWAEDEAKRVREQAIALEEARDRWERHGIKVVVDDDLRKEASAGVTWLNASEQVSVQGTVDRAESLLDKLKQMAADIRGKSRDTLHKIIHVVSQFISKLREWACKTGKLAEEFGEAAISKVGKSVSELQQNALEVGIGIKEGAKRVAGDCREGVEKITQKFTQKFKT* 971
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1501 970 Coils Coil 701 735 - -
Gso16g1501 970 MobiDBLite consensus disorder prediction 42 80 - -
Gso16g1501 970 PANTHER GPI-ANCHORED ADHESIN-LIKE PROTEIN 2 964 - -
Gso16g1501 970 Coils Coil 764 791 - -
Gso16g1501 970 PANTHER GPI-ANCHORED ADHESIN-LIKE PROTEIN 2 964 - -
Gso16g1501 970 ProSiteProfiles S-layer homology (SLH) domain profile. 592 660 IPR001119 -
Gso16g1501 970 Coils Coil 803 830 - -
Gso16g1501 970 Coils Coil 863 883 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1501 Gso-Chr16 35242561 35249151 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1501 - - gmx:100810148 1757.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1501 16 35242561 35249151 Gso9g1120 9 32187165 32194005 GST
Gso16g1501 16 35242561 35249151 Gso10g2090 10 47852586 47858195 PCT
Gso10g2090 10 47852586 47858195 Gso16g1501 16 35242561 35249151 PCT