Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gso16g1484 | ATGGGTTCTCGGTACGAAGTGGAAGTGAAGCCCTTATCAGCACGCGCGCTCAAGAACGTGAACTGGCGCCACGGCCCCAACCTCCCCTACGTCGTCGTTTGGGCCGACCGAAGCTACTTACTCTCCACGTCCGTGGACGAGAACGGCAACACCGACGCGAATTGGAATGAAACGCTCACAATTCCGTTGCCGGCTAAGCCCCTCGAGGATCAAAATTTGTTCATCCACGTGGTCCACGCCGGCTCGGGGGAGGACACCAAGTCGCTGATCGGCAAGGCTTGGCTCCGGCTGGTGGATATTGTCAACGACTTCGGAATCGGTGAGCGCGTGAGATGCACGCTCTCGCTGAAGCGTCCCTCGGGGAGGCCGCAAGGGAAGGCTGAGGTTAGCGTGACCATCAGGGAGTCGAGCTATGGTGCGCAGGGTGGGTACAACGCACCTCCCAACGGGGCACCACCACAAAAGGCGAATTGTTACGCTACGCCAAGTGGGTATCCTTATAATGCGACGGCGAAGGGATGGGCTACGCTCGCTGCGGTTTTTGGTGGAATATCTGTGGAAGATGCTGAGTATGTTGATGACAAGAATCAAGATGATGCGGAAGAAAAAAGAGTGGAGGATGATCTTGGTGCTGAGGACAAGATTCAAGATAACGTGGAAGCAAGAGTGGAGGATGATCTTGGTGACCATGCTGATGATGATGACGACTTCTGGCGATGA | 720 | 0.5556 | MGSRYEVEVKPLSARALKNVNWRHGPNLPYVVVWADRSYLLSTSVDENGNTDANWNETLTIPLPAKPLEDQNLFIHVVHAGSGEDTKSLIGKAWLRLVDIVNDFGIGERVRCTLSLKRPSGRPQGKAEVSVTIRESSYGAQGGYNAPPNGAPPQKANCYATPSGYPYNATAKGWATLAAVFGGISVEDAEYVDDKNQDDAEEKRVEDDLGAEDKIQDNVEARVEDDLGDHADDDDDFWR* | 240 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gso16g1484 | 239 | MobiDBLite | consensus disorder prediction | 192 | 226 | - | - | |
| Gso16g1484 | 239 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 4 | 134 | IPR035892 | - | |
| Gso16g1484 | 239 | PANTHER | CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN | 1 | 210 | - | - | |
| Gso16g1484 | 239 | Pfam | C2 domain | 7 | 100 | IPR000008 | - | |
| Gso16g1484 | 239 | SMART | C2_3c | 6 | 109 | IPR000008 | - | |
| Gso16g1484 | 239 | ProSiteProfiles | C2 domain profile. | 1 | 110 | IPR000008 | - | |
| Gso16g1484 | 239 | PANTHER | INGRESSION PROTEIN FIC1 | 1 | 210 | - | - | |
| Gso16g1484 | 239 | MobiDBLite | consensus disorder prediction | 192 | 239 | - | - | |
| Gso16g1484 | 239 | Gene3D | C2 domain | 4 | 139 | IPR035892 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Gso16g1484 | Gso-Chr16 | 35023259 | 35024251 | Tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Gso16g1484 | - | - | gmx:100790144 | 453.751 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Gso16g1484 | 16 | 35023259 | 35024251 | Gso16g1484 | 16 | 35023259 | 35024251 | ECH | |
| Gso16g1484 | 16 | 35023259 | 35024251 | Gso9g1102 | 9 | 31787871 | 31789004 | GST |