Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1455 ATGATCATAATCGAAGCTCCCATCGCCGTCAGATTCCACGCCACCGCCGCCATTCGCTCCGCCGCCGCACCTTCACCTCATAATAACCGTTCAATGTGGAGCGCCGATGACGTGAACGGTGTGCGTTATGCCGCTTCGTGCAGGCTCGCATGCAGCTGCGGTTTCGACGCGCCTTGGGTAAGAAGTAAAATAAATTCAGGCACTCCGTTCACAAGAAGAAACAAACTTGTAAAAAATAGAATTAGGGCATCATCAGAGCATCTGGGCTCCGCTCAGGATCCTCTAAAGAAAAATGAGAAGCCATCCTATCATCCATTTGAAGAAGTTGCCGTGTCAACATCAGAGAATAGTGAAGATGCTACACTTACTGCAGCAGAAACAAGTAGAACAATTATTGAGGTTAACAGCAAAGCAACTCTGATGTTCTCAAGTTTGATTAGTGATGAGTTTCATGAAAATATTATTTGGCCAGATTTGCCTTATTTGACTGATGAACATGGAAATATATACTTTCAAGTGAAGAACGGTGAAGATATTTTGCAATCCCTAACTTCCGAAAATAATTTTGTGCAAGTCATTGTTGGTATTAACTCCATGGAAATGATCTCCGAGATGGACTTATCTGGTCCTTCAGAAATTGACTTTGGGATAGAAGAAATTGATGATGAAGATACCGAGGATGTAGATGACAACAATGAAGATGAAGACAAAGATGAAGATGAGAATGAAGATTATGATTCAGAATGGGTGGCTGTGTTTTCAGATGATGATGAGCAAGAAGACGATGATGAAACACTTGCAGACTGGGCAAAATTGGAGACTATGCGATCTTCTCATCCGGTGTACTTTGCCAAAAAGTTAGCTGAGATTGCTTCAGATGATCCTGTTGATTGGATGGAGCAGCCTCCAGCTTGTGTGGCTATCCAAGGGGTTATAAGACCTGCTTTTGTTGATGAACATTCTACAATACAGAAGCATCTATCTGCCAATCAATCCAGTGATACTGACAAAAGTAAATCTATAGAAAGTAAAGGGGAAAATATTGGTGTGATTAATGGTCATGTGCTTAATTCAGAATCTTCTGGAGATAATGCGGCCCAGCAGGTTGAAAACAACGGGAATAGTGTCATCCCCTTTAGCGAGACTTCATTTTACAAATTGGTGATGATTAAGATTCAAGTGTTTTCTGCACAAGGGCAACCTACTGCCATTGAATTAGAAGACTACATGAATGCCCAACCTGATGTTATTGCACACTCTGCTTCCAAAATCATATCTCGTTTGAAAGCTGATGGAGAAGAGACCTTGGAAGCCCTTAAGTCCCTGTGTTGGAGATGCAAGGGTATTCAAGTGGAGGAGGCACAACTTATCTGTCTAGACTCCCTTGGTTTTGATCTAAGAGTTTGTTCTGGAACTCAGATTCAAACACTGAGATTTACATTCAAGAACAGGGCCACTTCCGAGTACAGTGCTGAGAGACAACTCAACGATATACTATTTCCAAGAATTCACCCAAAGCAGCAAAAAATGAAGCAAACACATCAAAATGAATGCTAA 1557 0.4155 MIIIEAPIAVRFHATAAIRSAAAPSPHNNRSMWSADDVNGVRYAASCRLACSCGFDAPWVRSKINSGTPFTRRNKLVKNRIRASSEHLGSAQDPLKKNEKPSYHPFEEVAVSTSENSEDATLTAAETSRTIIEVNSKATLMFSSLISDEFHENIIWPDLPYLTDEHGNIYFQVKNGEDILQSLTSENNFVQVIVGINSMEMISEMDLSGPSEIDFGIEEIDDEDTEDVDDNNEDEDKDEDENEDYDSEWVAVFSDDDEQEDDDETLADWAKLETMRSSHPVYFAKKLAEIASDDPVDWMEQPPACVAIQGVIRPAFVDEHSTIQKHLSANQSSDTDKSKSIESKGENIGVINGHVLNSESSGDNAAQQVENNGNSVIPFSETSFYKLVMIKIQVFSAQGQPTAIELEDYMNAQPDVIAHSASKIISRLKADGEETLEALKSLCWRCKGIQVEEAQLICLDSLGFDLRVCSGTQIQTLRFTFKNRATSEYSAERQLNDILFPRIHPKQQKMKQTHQNEC* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1455 518 Gene3D - 413 517 IPR037119 -
Gso16g1455 518 SUPERFAMILY FMN-binding split barrel 377 499 - -
Gso16g1455 518 PANTHER PENTATRICOPEPTIDE REPEAT (PPR) SUPERFAMILY PROTEIN 1 511 - -
Gso16g1455 518 PANTHER CREG1 PROTEIN 1 511 - -
Gso16g1455 518 MobiDBLite consensus disorder prediction 219 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1455 Gso-Chr16 34788760 34795939 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1455 - - gmx:100797899 960.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1455 16 34788760 34795939 Gso16g1455 16 34788760 34795939 ECH
Gso16g1455 16 34788760 34795939 Gso9g1063 9 30765960 30774648 GST