Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1454 ATGCTTGCGCTGACAGATTCTCCTCTACTTATTGCTAAAACATTTGAAGCAATTAAAATACCAACAAGTACACGAGGCACTGTGTTATGTGCTGCAAAAGGTCAAAGACCAAGATATCCCCGAGTTTGGAAGACCCATAAAAAAATTGGGACCATTTCCAAGGCTGCCAAGCTTGTTAACTCTATTAAGGAGCTGTCAAATGTCAAAGAGGAAGTTTATGGAGCTCTTGATTCCTATGTTGCTTGGGAATTAGAGTTCCCTTTAATTACAGTGAAAAAGGCTCTCAAGACCCTAGAATCCGAACAAGAATGGAAGCGGGTAATACAGGTAACAAAGTGGATGCTAAGCAAAGGTCAAGGGAAGACAATGGGAAGCTATTTCACATTACTTAATGCTTTAGTAGAGGATGACCGTCTTGATGAAGCTGAAGAGCTTTGGACGAAGTTATTAATGCAGTACATGGAAAGCTTGCCTCGTAGATTTTTTGATAAAATGATATCTATCTACCATAAGAGGGGCATGCATGAGAAGATGTTTGAGATATTTGCCGACATGGAGGAGCTTTGTCTTCGACCTAATATTGCTGTTGTCTCGATGATTGGGGATGCCTTCAAAGAGCTGGGTATGCTAGACAAATACCAGAAGTTACATGCAAAATATCCACCACCACAATGGGAATACAGATACATCAGAGGAAAGCGTGTAAAAGTCAAAGTGGAAGTTCAGTCTAATCAGGTCAACACATACATAGAAAGGCATGGGAATGTTGAACCAAACTCAGACTTAAACAAGAATTATAGATTATCTGAAAAGACTTCAGAGATAGTCGATCAACAACTCAGACAGGATGCGAATGTAATATCCATGAAACCTGAACAAATTTCAGGCATAAACAACAATTATAGATCTGAAGAGACTTCAGACATGATTGATGATCAGCAACTTGGACAGGAAGCAGATGTAATATCCATGGAACTTGAACAAATTTCAGATGATTCATATGACAGTATGGAACCTATTTTCAATGTATAA 1032 0.3886 MLALTDSPLLIAKTFEAIKIPTSTRGTVLCAAKGQRPRYPRVWKTHKKIGTISKAAKLVNSIKELSNVKEEVYGALDSYVAWELEFPLITVKKALKTLESEQEWKRVIQVTKWMLSKGQGKTMGSYFTLLNALVEDDRLDEAEELWTKLLMQYMESLPRRFFDKMISIYHKRGMHEKMFEIFADMEELCLRPNIAVVSMIGDAFKELGMLDKYQKLHAKYPPPQWEYRYIRGKRVKVKVEVQSNQVNTYIERHGNVEPNSDLNKNYRLSEKTSEIVDQQLRQDANVISMKPEQISGINNNYRSEETSDMIDDQQLGQEADVISMELEQISDDSYDSMEPIFNV* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1454 343 Pfam PPR repeat 165 188 IPR002885 -
Gso16g1454 343 Gene3D Tetratricopeptide repeat domain 44 307 IPR011990 GO:0005515
Gso16g1454 343 PANTHER OS01G0757700 PROTEIN 4 283 - -
Gso16g1454 343 TIGRFAM PPR: pentatricopeptide repeat domain 163 193 IPR002885 -
Gso16g1454 343 PANTHER OS01G0757700 PROTEIN 4 283 IPR044646 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1454 Gso-Chr16 34784854 34787947 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1454 - - gmx:100781797 685.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1454 16 34784854 34787947 Gso16g1454 16 34784854 34787947 ECH
Gso16g1454 16 34784854 34787947 Gso9g1062 9 30762194 30765220 GST