Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1440 ATGACCATGAAAGATTCCATTGTTCTATATTCAGCTTTGGGAAGAGGACACCTTGTTTCAATGGTGGAACTAGGTAAACTCATACTAAGCCACCACCCTTCACTTTCCATCACCATTCTTTTCCTAACCCCACCCCCCAACCAAGACACCCCCACCTCCCCCACCGCCTTCACCTGCGACGCCACCGCCAAATACATCGCCGCCGTCACCGCCGCCACTCCCTCCATTGCCTTCCACCGCATCCCTCAGATCTCAATTCCCACCGTCCTCCATCCCCATGCCCTCAACTTCGAGCTCTGCCGCGCCACCGGCCACCACCTCCGCCGCATCCTCAACTCCATCTCCCAAACCTCAAACCTCAAAGCAATAGTCTTGGACTTCATGAACTACAGTGCCGCACGTGTCACCAACACGCTTCAAATCCCCACTTACTTCTACTACACTTCCGGCGCCTCCACCCTCGCCGTTTTCCTTCAGCAAATCATCATTCACGAAAACAACACCAAGTCCATCAAGGAACTCATCATACCAGGGTTACCGAAAATTCACACCGATGATTTGCCAGAGCAAGGGAAGGACCAGGTTTTTATTGACATTGCCACGTGCATGAGGGACAGTTACGGGGTTATAGTAAACACCTTTGATGCTATCGAAAGTAGGGTTATAGAAGCGTTCAACGAAGGGTTGATGGAAGGAACTACGCCACCAGTGTTTTGCATTGGACCGGTGGTTTCGGCTCCTTGTAGAGGCGATGATAACGGGTGTTTGAGTTGGCTCGATTCACAACCGAGTCACAGCGTTGTTTTCTTGAGTTTCGGAAGCATGGGGAGATTCTCGAGGACTCAGTTGAGAGAGATTGCTATTGGGTTGGAGAAGAGTGAGCAAAGGTTCTTGTGGGTCGTGAGGAGCGAGTTCGAAGAGGGTGACTCGGCGGAGCCACCGAGCTTGGACGAGTTGTTGCCAGAAGGGTTTTTGGAGAGGACCAAGGAGAAGGGCTTAGTGGTGAGGGACTGGGCCCCACAGGCGGCGATACTGAGTCATGACTCGGTGGGAGGGTTTGTGACTCACTGCGGGTGGAACTCGGTGTTGGAGGCGGTGTGTGAAGGTGTGCCAATGGTGGCGTGGCCTCTCTACGCGGAGCAGAAGCTGAATAGGGTGATATTGGAGGAGGAAATGAAGGTGGGTTTGGCGGTGAAGCAGAACAAAGACGGGTTAGTGAGTTCCACCGAGTTGGGGGACCGAGTGATGGAACTCATGGACTCGGACAGAGGGAAGGAGATTAGACAGAGGATTTTTAAGATGAAAATCAGTGCCACCGAAGCAATGTCTGAAGGTGGATCTTCTGTCGTTACTTTGAATCGGTTGGTAGATATATGGAGGGAGCACTAA 1389 0.522 MTMKDSIVLYSALGRGHLVSMVELGKLILSHHPSLSITILFLTPPPNQDTPTSPTAFTCDATAKYIAAVTAATPSIAFHRIPQISIPTVLHPHALNFELCRATGHHLRRILNSISQTSNLKAIVLDFMNYSAARVTNTLQIPTYFYYTSGASTLAVFLQQIIIHENNTKSIKELIIPGLPKIHTDDLPEQGKDQVFIDIATCMRDSYGVIVNTFDAIESRVIEAFNEGLMEGTTPPVFCIGPVVSAPCRGDDNGCLSWLDSQPSHSVVFLSFGSMGRFSRTQLREIAIGLEKSEQRFLWVVRSEFEEGDSAEPPSLDELLPEGFLERTKEKGLVVRDWAPQAAILSHDSVGGFVTHCGWNSVLEAVCEGVPMVAWPLYAEQKLNRVILEEEMKVGLAVKQNKDGLVSSTELGDRVMELMDSDRGKEIRQRIFKMKISATEAMSEGGSSVVTLNRLVDIWREH* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1440 462 Gene3D Glycogen Phosphorylase B; 7 448 - -
Gso16g1440 462 PANTHER ISOFLAVONE 7-O-GLUCOSYLTRANSFERASE 1 3 462 - -
Gso16g1440 462 ProSitePatterns UDP-glycosyltransferases signature. 338 381 IPR035595 -
Gso16g1440 462 CDD GT1_Gtf-like 7 452 IPR002213 GO:0008194
Gso16g1440 462 PANTHER GLYCOSYLTRANSFERASE 3 462 - -
Gso16g1440 462 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 252 425 IPR002213 GO:0008194
Gso16g1440 462 Gene3D Glycogen Phosphorylase B; 253 443 - -
Gso16g1440 462 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 7 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1440 Gso-Chr16 34597118 34598858 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g1440 4 459 Glycosyltransferase AT3G16520 44.142 5.45e-121 359
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1440 - K12938 gmx:100775730 915.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1440 16 34597118 34598858 Gso9g1041 9 29790638 29792818 GST