Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1015 ATGGCTGCTGCGGTTAGTGCTGCAGTCTCTTTTCCATCCACCAAGTCTACCTCTCTCCCAAGCAGGACCTCCATCATTACCCCAGAGAGAGTTGTATTCAAGAAGGCTTCATTGCAATACAGAGATGTTTGTAGCAGTGGAAGGGTAGTTTCCATCAGAGCTCAAGTCACCACTGAGGCTCCAGCCAAGGTTGAAAAAGAGTCCAAGAAACAGGATGAAGGTGTGGTTGTGAACAAGTTCAAACCCAAGACCCCTTACGTTGGTAGATGCCTGCTCAACACAAAGATCACTGGGGATGATGCTCCAGGAGAAACTTGGCACATGGTCTTCAGCACCGAGGGAGAGATTCCTTACAGAGAAGGACAATCAATTGGGGTAATTCCAGATGGTGTTGACAAGAATGGCAAACCTCATAAACTGAGATTGTATTCTATTGCTAGCAGTGCCATTGGTGATTTTGGAGATTCCAAGACTGTTTCTCTATGCGTGAAACGGCTAGTGTACACAAATGAAAATGGAGAAATTGTCAAGGGAGTCTGCTCAAATTTCTTGTGTGACCTGAAGCCAGGAGCTGAAGTAACAATAACTGGACCTGTTGGGAAAGAAATGCTTATGCCAAAAGATCCTAATGCCACCATCATCATGTTGGGAACCGGAACCGGGATTGCCCCATTTCGCTCATTTTTATGGAAAATGTTCTTTGAGAAACACGAAGATTACAAGTTCAATGGTTTGGCATGGCTCTTTTTGGGTGTCCCTACAAGCAGCTCATTGCTATATAAGGAGGAATTTGAGAAGATGCAAGAGAAATATCCTGACAACTTCAGGCTTGACTTCGCTGTGAGCCGAGAGCAAACAAACGAGAACGGAGAGAAGATGTACATCCAAACCCGAATGGCTCAATATGCAGAAGAGCTGTGGGAATTACTGAAGAAGGATAACACTTTTGTGTACATGTGTGGACTAAAAGGAATGGAAAAGGGTATTGATGACATTATGGTGTCATTGGCTGCCAAAGATGGCATTGATTGGACTGAGTACAAGAGGCAATTGAAGAAATCAGAGCAATGGAATGTCGAAGTCTATTAA 1089 0.4408 MAAAVSAAVSFPSTKSTSLPSRTSIITPERVVFKKASLQYRDVCSSGRVVSIRAQVTTEAPAKVEKESKKQDEGVVVNKFKPKTPYVGRCLLNTKITGDDAPGETWHMVFSTEGEIPYREGQSIGVIPDGVDKNGKPHKLRLYSIASSAIGDFGDSKTVSLCVKRLVYTNENGEIVKGVCSNFLCDLKPGAEVTITGPVGKEMLMPKDPNATIIMLGTGTGIAPFRSFLWKMFFEKHEDYKFNGLAWLFLGVPTSSSLLYKEEFEKMQEKYPDNFRLDFAVSREQTNENGEKMYIQTRMAQYAEELWELLKKDNTFVYMCGLKGMEKGIDDIMVSLAAKDGIDWTEYKRQLKKSEQWNVEVY* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1015 362 PIRSF Frd-NADP+_RD 1 362 IPR015701 GO:0016491
Gso16g1015 362 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 83 205 IPR017927 GO:0016491
Gso16g1015 362 Pfam Oxidoreductase NAD-binding domain 215 329 IPR001433 GO:0016491
Gso16g1015 362 PANTHER FERREDOXIN--NADP REDUCTASE, LEAF ISOZYME 1, CHLOROPLASTIC 1 362 - -
Gso16g1015 362 CDD CYPOR_like_FNR 78 362 - -
Gso16g1015 362 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 203 362 IPR039261 -
Gso16g1015 362 PIRSF FNR-PetH 1 362 IPR035442 GO:0016491
Gso16g1015 362 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 118 128 IPR001709 GO:0016491
Gso16g1015 362 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 141 148 IPR001709 GO:0016491
Gso16g1015 362 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 178 187 IPR001709 GO:0016491
Gso16g1015 362 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 214 233 IPR001709 GO:0016491
Gso16g1015 362 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 244 253 IPR001709 GO:0016491
Gso16g1015 362 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 256 267 IPR001709 GO:0016491
Gso16g1015 362 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 292 308 IPR001709 GO:0016491
Gso16g1015 362 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 316 324 IPR001709 GO:0016491
Gso16g1015 362 Gene3D - 200 362 IPR039261 -
Gso16g1015 362 SUPERFAMILY Riboflavin synthase domain-like 62 206 IPR017938 -
Gso16g1015 362 Gene3D Translation factors 53 199 - -
Gso16g1015 362 PANTHER - 1 362 IPR015701 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1015 Gso-Chr16 27921521 27924833 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1015 K02641 - gmx:100793840 730.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0405 2 4298944 4302497 Gso16g1015 16 27921521 27924833 GST
Gso11g0654 11 5879031 5882413 Gso16g1015 16 27921521 27924833 PCT
Gso16g1015 16 27921521 27924833 Gso11g0654 11 5879031 5882413 PCT