Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0728 ATGGTTGAAGTCGAAGAGATAGAGCTGGATTTGGCGTTGTCCATAGGGGGCAGTTTCGGGAAATACACGGTGGAGAAGCCCGCACCGGATTCCGAAGCGCGTGTTTCAAATTCGGATAGTCGCGATGGAATGCGCGTGGTGATGGAGCCGCGCGAGAAGCGCGAGATTCAGGCGTTTCGGAGAATGGAGGCGAGGAAGAAGAGGGAGCGCGTGAGGGAACCGTCCGAGCCCGAATCGCAATTACGGGATTTTAAGAGGGAGAAAACGGAATGCGGTAACGGCGTTAGTGGCTCGTGGACAGCGGCGACGACGACGCCGTATCGCATGCACCAGTTCGCGACGGTGCAGTACTTGCCGTTGAATAACGGCTTTCCGTTACCGTGCTGGGTCGGAGGGGAAAAGAATGTGGGTGGAGTAGACGGCGTTGACGGCATTAACGGTGGAGGAGATAGGAAAGCCAAGTCTAATGGGTCTTCCAGGTGTAGTTCTTCTGTGGTTTCGGATTATCAAAGCTCTTCTCGTGAAGAAGGAGGTAGCACAGACAGTCACAGCCATTCAGTTCATTCCTTGGCAGAACCGGCCCAATTGAACACTTCCAAGGAAATAAGCATCGAAACGTCCCAACCTGAAGAAAGTGCTTCCGCTTCATCTCACCCTATAAGACCCAAACAAGGCAACACCACCATCCAAGAGATAAAAAAGCACATTGCAAAGGAAACGCGACCAAAACCAAACCCCAATTCACCCGAGCCAATTGAAAACAAACCTTTGTCTAACGAAAACTTAACCAAAGTTGAAATAATGGGAAAGCCTCCAAAGCCTCTCTCTCACACCTCTTATTCGCTCCCTCCAATGCCCTATGTGTCTACAAAAGGGGACAATGGGAGAACGGTTAATGGGTTTCTCTACAGATACACAAAATCTGAGGTCAGCATTATTTGTGTTTGCCATGGAAGCACATTTTCACCTGCAGAGTTTGTGCAGCATGCAGGGGGCACAGACACCACGCACCCTCTAAGGCAAATCACAGTTATTCCTTCTGTCTTTGGGTGA 1053 0.5043 MVEVEEIELDLALSIGGSFGKYTVEKPAPDSEARVSNSDSRDGMRVVMEPREKREIQAFRRMEARKKRERVREPSEPESQLRDFKREKTECGNGVSGSWTAATTTPYRMHQFATVQYLPLNNGFPLPCWVGGEKNVGGVDGVDGINGGGDRKAKSNGSSRCSSSVVSDYQSSSREEGGSTDSHSHSVHSLAEPAQLNTSKEISIETSQPEESASASSHPIRPKQGNTTIQEIKKHIAKETRPKPNPNSPEPIENKPLSNENLTKVEIMGKPPKPLSHTSYSLPPMPYVSTKGDNGRTVNGFLYRYTKSEVSIICVCHGSTFSPAEFVQHAGGTDTTHPLRQITVIPSVFG* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0728 350 Pfam Tify domain binding domain 310 343 IPR032308 -
Gso16g0728 350 Pfam Ethylene-responsive binding factor-associated repression 3 36 IPR012463 -
Gso16g0728 350 MobiDBLite consensus disorder prediction 24 83 - -
Gso16g0728 350 MobiDBLite consensus disorder prediction 152 231 - -
Gso16g0728 350 MobiDBLite consensus disorder prediction 141 260 - -
Gso16g0728 350 MobiDBLite consensus disorder prediction 35 83 - -
Gso16g0728 350 PANTHER NUCLEAR TRANSPORT FACTOR 2/RNA RECOGNITION MOTIF PROTEIN 2 349 - -
Gso16g0728 350 PANTHER AFP HOMOLOG 2 2 349 IPR031307 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0728 Gso-Chr16 12756805 12759862 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0728 - - gmx:100809595 648.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g0728 16 12756805 12759862 Gso3g0745 3 25583892 25586615 GST