Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0676 ATGGAGTTCATACAGAGCCGCGTGGAGCCGTGGGTAAGGGACCAGCGGACGCGGCTGCTGGGGCTGAAGGAGAAGGTGTTGTGGGGCCCACTCCAGTGGCGGATGAAGTGGCCGTGGGCGTCGCACCGCGAGCATAAGAAGCGGATCCAAGAAGAGTACCAGCGCTTCCGGAGCCTCTGCCGCGCCCTCAAGGCGGAATCCGTCTCCGATTTGCAGGACCTTCTCTGCTGCATGGTCCTCTCCGAGTGCGTCTACAAGAGACCTGCTGCTGAGATGATTCGTGCTGTAAATAAATTTAAGGATGATTTTGGTGGACAAGTTGTTGCTTTGGAGCGGGTGCAACCTTCGTCAGATCATGTTCCTCATAGGTATTTGTTGGCAGAGGCAGGAGATACTTTATTTGCCTCCTTTATTGGAACAAAGCAGTACAAGGATGTAATTGCTGATGCAAACATACTTCAAGGTGCCATCTTTCATGATGATGCTTTCGAGGAATCTGACAAGCATGATGCGACTGAATCTGACGAGGATGAAAACCAAAACGGAAAAGATTATATGTGGAATCCTCTACAATCAAAGCCTAAAAAACTGAAGAGAAAATACAAACCTGCAGCTCATAGGGGTTTCATGGCTCGTGCTAAAGGAATACCTGCTTTAGAATTATATAGGCTTGCTCAGAAGAAGAAACGCAAGCTTGTTCTATGTGGCCATTCACTTGGTGGAGCAGTAGCCGCATTAGCTACTCTTGCCATTCTTAGACTAATTGCTGCTTCATCTTCATCAAAGGAAAATGAAAATGTCTCTATCAAATGTATTACATTTTCTCAGCCTCCTGTTGGAAATGCTGCTTTGAAGGACTATGTTAATAGAAAAGGTTGGCAGCATTATTTCAAGAGTTACTGCATTCCGGAAGATTTGGTTCCACGTATTTTATCTCCTGCTTATTTTCACCATTATAATGCTCAGACTCAGCCCGGGCCTTCTGAAAATGAAACTGACGGCTCAATATTGAGAAAACATGAGCAAGGGGTAGGGAAGCCGGAAGAGAAGGATGTAGAGCAGTTGGTTTTGGGGGTAGGTCCTGTGCAGAGATCGTTCTGGAGACTCTCAAGGCTAGTTCCTTTGGAAGGTCTACGAAGACAATTAAGTAAATGCAGAGAAAGACGGGTCAATTTTATTGAAACAAATTCATTGCCTGATTCTCTTGCTAATACTTTGATTGAGGAGGAAGTAGTTGCACCACAGTCACTTGAAATACAAGAGGGTTCTGATGGCATATCACTCAAGCCTTTACCTGATACTGATAAACATTCATTTGAGGTTCCAACTAATGGGAAAACAGATACAAAGAACAATGCTATGACCGGAGATGAAAGAAAGTGGGCCAGAGTGCCTTATTTACCTTCATATGTGCCATTTGGACAGCTTTATTTATTGGGAAATTCCTCTGTAGAGTCTCTATCAGGTGCAGAGTACTCAAAGATGACATCGGTCAGATCAGTGATTGCTGAATTGAGGGAAAGATTTCAATCACATTCAATGAAATCATATCGATCTCGATTTCAGAGAATCTATGACTTGTATTTGAGTGATGATTCCTCATCTTTCTCACGGATTGAGCAACAGTTTCCTCATCTGAAGCAATGGCTTGGCTTTACAGCTGCTGGCACTGTGGAGCTTGGTCATATAGTTGAGTCCCCTGTTATTCGAACTGCAACTTCAATTGTTCCTTTGGGATGGAATGATGGACTAGGAGCGAAAAATGGAGAACCTCTGAAAGTTGATATTACTGGTTTTGGGTTGCATCTATGTACACTTGTTCATGCTCAAGTGAATGGTAACTGGTGCTCAACTACAGTTGAATCATTTCCTTCTCCACCAAACTATTCTTCAAATCAAGGAATCCAGCCTGAGTTACAGAAGTTGAGAATATTAGTTGGTCCTCCTCTAAGAAGTCCACCAAAGCATCAAACTGTGTTAGACTCGTTGATGCCTGCTTTTACTTCTGTTGACTCTGAGACTGCAAGTAGTTCAGCACCTGTTGACAAGGATAAATTCATCCGTCCAGAAAGTTTAAATAACTTTGTAATATTTTGCACCAGTGATTTTACAACTGTTTCCAAAGAAGTTCATGTGAGAACACGTAGAATACGATTAGTTGGGCTAGAGGGAGCTGGTAAGACTACTCTTTTAAAGGCTGTCTTGCATAAATGCAAACCAAATACTGCCACCAATGAGGATGCAGTTTCAGAGGTTGTGCGAGAAGTTATTGCTGATGGTTTGTGCTATTGTGACTCCAATGGAATAAATATGCAGGAGCTAAATGTGGAAACCTCCCGCTTCAGGGATGAACTATGGCTTGGAATCCGAGATCTAAGTCGGAAGACAGATTTGATTGTTTTCGTTCATAACTTGTCCCATAGCATACCTCGATGTAGTAATTCAAATGATACTCAACAAAGGCCAGTCTTGTCACTTTTTTTGGATGAAGCTAAATCTCTTGGAATTCCTTGGGTTCTTGCAATCACAAACAAATTTGCAGTTAGTGCACACCATCAAAAGGCAGCAATTGATGCTGCTTTGAAAGCATACCAAGCATCTCCTAGCGCAGCTGAAGTTATAAATTCTTGTCCATATGTTATGCCCGGATTTGTTGGGGCTTCTCTTTCCTTGGATGCAACCAATACAGATTCTAATAGAAGGGTGGACGCTGAAAAGCTTATATTTGCTCCTATTAACTTTATTAGGAAGCCTTTCCTGAAAAAGGAGATTGTTTTTCCAGTTGAAGGAGTAAATTCTCTTTGTCAGCAAATCCACCGTATACTCCGCAGTCGTGAGGAGTCTTCCTTTCAGGAATTTGCAAGAGATAGGCTTCTAATGGAGTTGGCACGAGAACAAGCAATGTCGATCGAGGCAAGTAGAGATGCTCAAGCTAAGGCAAATTCATTGAATTCTGCTGCTGTGGGGGCATCTGTTGGTGCTGGTCTTGGCCTTGTCCTGGCAATTGTAATGGGTGCAGCATCTGCCCTGAGGAAGCCCTAA 3042 0.4316 MEFIQSRVEPWVRDQRTRLLGLKEKVLWGPLQWRMKWPWASHREHKKRIQEEYQRFRSLCRALKAESVSDLQDLLCCMVLSECVYKRPAAEMIRAVNKFKDDFGGQVVALERVQPSSDHVPHRYLLAEAGDTLFASFIGTKQYKDVIADANILQGAIFHDDAFEESDKHDATESDEDENQNGKDYMWNPLQSKPKKLKRKYKPAAHRGFMARAKGIPALELYRLAQKKKRKLVLCGHSLGGAVAALATLAILRLIAASSSSKENENVSIKCITFSQPPVGNAALKDYVNRKGWQHYFKSYCIPEDLVPRILSPAYFHHYNAQTQPGPSENETDGSILRKHEQGVGKPEEKDVEQLVLGVGPVQRSFWRLSRLVPLEGLRRQLSKCRERRVNFIETNSLPDSLANTLIEEEVVAPQSLEIQEGSDGISLKPLPDTDKHSFEVPTNGKTDTKNNAMTGDERKWARVPYLPSYVPFGQLYLLGNSSVESLSGAEYSKMTSVRSVIAELRERFQSHSMKSYRSRFQRIYDLYLSDDSSSFSRIEQQFPHLKQWLGFTAAGTVELGHIVESPVIRTATSIVPLGWNDGLGAKNGEPLKVDITGFGLHLCTLVHAQVNGNWCSTTVESFPSPPNYSSNQGIQPELQKLRILVGPPLRSPPKHQTVLDSLMPAFTSVDSETASSSAPVDKDKFIRPESLNNFVIFCTSDFTTVSKEVHVRTRRIRLVGLEGAGKTTLLKAVLHKCKPNTATNEDAVSEVVREVIADGLCYCDSNGINMQELNVETSRFRDELWLGIRDLSRKTDLIVFVHNLSHSIPRCSNSNDTQQRPVLSLFLDEAKSLGIPWVLAITNKFAVSAHHQKAAIDAALKAYQASPSAAEVINSCPYVMPGFVGASLSLDATNTDSNRRVDAEKLIFAPINFIRKPFLKKEIVFPVEGVNSLCQQIHRILRSREESSFQEFARDRLLMELAREQAMSIEASRDAQAKANSLNSAAVGASVGAGLGLVLAIVMGAASALRKP* 1014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0676 1013 Pfam Lipase (class 3) 186 310 IPR002921 GO:0006629
Gso16g0676 1013 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 708 858 IPR027417 -
Gso16g0676 1013 Gene3D alpha/beta hydrolase 72 349 IPR029058 -
Gso16g0676 1013 SUPERFAMILY alpha/beta-Hydrolases 67 320 IPR029058 -
Gso16g0676 1013 CDD Ras_like_GTPase 719 881 - -
Gso16g0676 1013 Gene3D - 716 874 IPR027417 -
Gso16g0676 1013 MobiDBLite consensus disorder prediction 423 453 - -
Gso16g0676 1013 MobiDBLite consensus disorder prediction 167 189 - -
Gso16g0676 1013 Coils Coil 46 66 - -
Gso16g0676 1013 PANTHER F21O3.11 PROTEIN 32 1013 - -
Gso16g0676 1013 MobiDBLite consensus disorder prediction 167 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0676 Gso-Chr16 9661723 9673748 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0676 1 1013 Acyl Lipid Metabolism Gene Families AT3G07400 60.777 0.0 1226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0676 - - gmx:100797525 1943.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g0676 16 9661723 9673748 Gso3g0783 3 28300327 28327337 GST