Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0675 ATGGATGTCAAAACAAAAAGGAGAGCTGATGTAGAGAATGGCGATGAAGGAGAAGACTTAGTTCTAGCTACTCTGGTTGCCAATGGAGATGACATTAGTCCTCTTGTCAGACACGCCTTCGAAATGGGGCGGCCCAAGGGGCTCCTACGCCAGCTTGATTTTGTGGTGAAGAAAAAGGAAGCTGAAATTGAGGCAATGTGTAAAACCCACTATGAGGAATTCATCCTTGCAGTTGATGAACTTCGAGGCGTGTTAGTTGATGCTGAAGAGCTCAAGAGTGAGCTCCAAAGTGATAATTTTAAGTTGCAGCAGGTTGGCAGCACCCTTCTTATCAAGCTTGAGGAGCTTCTTGAATCGTATACCGTCAAGAAGAATGTGACTGAAGCTATAAAAATGTCAAAGAACTGTATTAAAGTATTGGAGCTTTGTGTGAAGTGCAACAATCACATTTCAGAAAGCCAGTTTTATCCTGCACTGAAAACTGTGGATTTACTTGAGAAATGTTACATTCAGAATATTCCTGCCAGGGCTCTCAAAAGGGTGATAGAGAAAAAAATTCCTTCCATAAAATCGCACATTGAGAAGAAAGTATGCAGTCAAGTCAATGAATGGATGGTCCAAATAAGGAGTTCTTGTAAAATAATTGGGCAAACGGCAATTGGTCGTGCTGCTCAAGTTCGTCAGAGGGATGAGGAAATGCTGGAAAGGAAGAGAAAGGCTGAGGGATTAAATATTTCAGGGGTTGATGATCAAGCTTATAATTTGGTGGTTGAAGAAGATGAAGATTCTGCCATGAAATTTGATCTCACACCTCTTTATCGTGCTTGTCATATTCATAGTTGCCTGGGAATCCTGGAGCAGTTTCATGACTATTACTATAAGAACAGGTTGTTACAATTGAATTCGGATTTGGAGATATCTTCTGCTCAACCTTTTGTCGAATCACATCAGACATTTTTGGCTCAAATTGCTGGGTACTTCATAGTGGAGGATAAGGTCCTGAGGACTGCTGGTGGGCTCCTGGTACCCGATAAGGTTGAAACTATGTGGGAGACTGCTTTAGCAAAAATAACATCAATGTTGGACACGCAATTCTCTCATATGAATTCTGCCACAAATCTTCTCCTAGTTAAGGATTATGTTACACTTCTTGGGTCTACTCTTAGACAATATGGATATGACATTGGCCAACTTCTTGATGTGCTTGATAATAGCCGTGACAAATACCATAGGCTTCTTTTGCAAGAATGTCAGAAACAAATTGTTGATGTTCTTGGCAACGACTCATATGAGCAGATGGTGATAAAAAGGGATACTGATTATGAGAATAATGTTCTGTCATTTAATATTCAAACATCAGATATTATGCCTGCTTTTCCATATGTTGCACCATTCTCCTCCATGGTACCCGATGCTTGTCGCATTGTGAGATCCTTCATCAAAGGCTCTGTTGATTACTTGTCTAATGGTGTACGTACCGGTTTCTTTGATTTTTTGAGGAAGTATTTGGACAAGTTCCTGATAGAAGTATTAAACGAAACTTTACTTGATACAATCAATAGTGGAAATATCAGTGTGTCTCAAGCAATGCAGCTTGCTGCAAATATAACTGTCCTTGAAAGAGCTTGTGACTATTTCCTTCGACATGCTGCTCAACAGTGTTGCATCTCAGTTCGATCAGCTGAGAAGCCCCAAGCTACTTTAACCGCGAAGGTGTTACTCAAGACTTCGAGGGATGCGGTTTATATTACTCTGCTGAGTTTGGTAAACACAAAATTAGATGAGTATATGAATCTTGTAGAAAGTATCAACTGGACTTCTGAGGAGGCAAAGCCAAATGGAAATGACTACATAAATGAAGTGATCTTTTACCTTGATTCACTAATGTCCACAGCGCAACAAATTTTACCCCTAGATGCTATGTACAAGGTTGGGACAAGTGCAATTGAGCATATTTCCAATACAATTGTGGCTGCTTTCCTTAGTGATAATGTCAAAAGGTTTAATGCAAATGCAGTGATGAATTTCAACAATGATCTTAGGATGTTAGAGAGTTTTGCAGATGAGAGGTTCCATTCTTCTGGCTTGGCTGAAATTTACTCGGGAGATAGTTTCAAGAGCTGTATGATAGAAGCACGACAATTAATCAATCTTCTGTCAAGTAGTCAGCCTGAGAACTTCATGAATCCTGTAATAAGGGAGAAAAACTACTATGCGTTGGATTATAAGAGGGTAGCCTCCATTTGTGATAAATTCAAGGATTCTCCAGATGGGATATTTGGAAGTCTTTCAAATAAAAATACAAAGCAAAGTGCTAAAAAGAAATCAATGGACATGCTCAAAAAGCGACTTAAGGATTTCAATTGA 2367 0.395 MDVKTKRRADVENGDEGEDLVLATLVANGDDISPLVRHAFEMGRPKGLLRQLDFVVKKKEAEIEAMCKTHYEEFILAVDELRGVLVDAEELKSELQSDNFKLQQVGSTLLIKLEELLESYTVKKNVTEAIKMSKNCIKVLELCVKCNNHISESQFYPALKTVDLLEKCYIQNIPARALKRVIEKKIPSIKSHIEKKVCSQVNEWMVQIRSSCKIIGQTAIGRAAQVRQRDEEMLERKRKAEGLNISGVDDQAYNLVVEEDEDSAMKFDLTPLYRACHIHSCLGILEQFHDYYYKNRLLQLNSDLEISSAQPFVESHQTFLAQIAGYFIVEDKVLRTAGGLLVPDKVETMWETALAKITSMLDTQFSHMNSATNLLLVKDYVTLLGSTLRQYGYDIGQLLDVLDNSRDKYHRLLLQECQKQIVDVLGNDSYEQMVIKRDTDYENNVLSFNIQTSDIMPAFPYVAPFSSMVPDACRIVRSFIKGSVDYLSNGVRTGFFDFLRKYLDKFLIEVLNETLLDTINSGNISVSQAMQLAANITVLERACDYFLRHAAQQCCISVRSAEKPQATLTAKVLLKTSRDAVYITLLSLVNTKLDEYMNLVESINWTSEEAKPNGNDYINEVIFYLDSLMSTAQQILPLDAMYKVGTSAIEHISNTIVAAFLSDNVKRFNANAVMNFNNDLRMLESFADERFHSSGLAEIYSGDSFKSCMIEARQLINLLSSSQPENFMNPVIREKNYYALDYKRVASICDKFKDSPDGIFGSLSNKNTKQSAKKKSMDMLKKRLKDFN* 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0675 788 PANTHER EXOCYST COMPLEX COMPONENT 1 788 - -
Gso16g0675 788 PANTHER SEC15 1 788 IPR007225 GO:0006886|GO:0090522
Gso16g0675 788 Pfam Exocyst complex subunit Sec15-like 441 752 IPR046361 -
Gso16g0675 788 Coils Coil 78 98 - -
Gso16g0675 788 PIRSF Sec15 1 788 IPR007225 GO:0006886|GO:0090522
Gso16g0675 788 Gene3D Dsl1p vesicle tethering complex, Tip20p subunit, domain D 577 727 IPR042044 -
Gso16g0675 788 Gene3D - 395 567 IPR042045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0675 Gso-Chr16 9652871 9655284 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0675 K19985 - gmx:100796988 1546.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g0675 16 9652871 9655284 Gso3g0784 3 28334860 28338358 GST