Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0664 ATGAACCAAACCGTCGTCACCAACTTCGAAAAGCCAATAGGCTGTTACTCTCCATCGGTTCAAGAGCTTATTGTTATTGACGATGTGCTCTCAAGCATGACTGGCATTGAAGGGCGTTACATCTTAATCAAAGCAGTTCGTGGAAAGAATGATGATATTGCTTTCCTGGTTGACCCATCTATGGATTTGGCCCTGCAGGAGTTGGCAAAACGGATATTCCCACTTTGCAAGAGCTTTCTGTTGATCAGCCAGTTTGTGGAGTCAAGGTCTCAGTTCCAGAGTGGCCTGGTTAATCATGCCTTTTCTGCTGCACTGAGGGCACTTCTTCTCGATTACCAGGCTATGGTGTCACAGCTCGAACACCAATTCCGCCTTGGAAGGCTTTCTCTTCAAGGATTGTGGTTCTATTGTCAGCCCATGATGAGGTCAATGCAGGCATTATCCACTGTCATACAAAAGGCTTCAGTCAACAATATTTCTGGTTCTGCTGTTCTTAACTTACTGCAGAGCCAGGCAAAAGCTATGGCTGGAGACAATGCTGTCAGGATGATGCTGGAGAAAATGACCCAATGTGCAAGTAGTGCTTACATGAGCATACTTGAAAGATGGGTTTACGAAGGTATTATAGATGATCCTTACGGTGAATTTTTCATCGCAGAGGACAAATCTCTTCAAAAGGAGAGTCTCACCCAAGATTATGAAGCTAAGTATTGGCGACAACGATACAGCCTCAAAGATGGAATTCCTAGTTTCCTTGAAAATATTGCGGGGACAATTTTGACAACTGGAAAATATCTAAATGTCATGAGAGAATGCGGGCATAATGTTCAGGTACCTCCATCAGAAAATTCAAAACTCATGAGTTTTGGCTCAAATCATCATTATCTTGAATGTATTAAGGCTGCTTATAACTTTGCAAGCGGTGAACTCTTGAATCTCATTAAGGAAAAGTATGATCTAACGGGAAGGCTGCGTTCTATAAAACACTACCTTCTTCTTGATCAGGGTGATTTCTTAGTACATTTTATGGATATTGCACGAGATGAACTGGCTAAAAAGCCTGATGAAGTCTCAGTTGAGAAGCTGCAGTCTCTTCTAGACCTTGCATTGCGTACTACAGCAGCTGCAGCAGATCCTTTTCACGAAGGCTTAACCTGTGTTGTGGAAAGATGTTCTCTGCTTAGAAGGTTGGGCACATTTAATGATCTTGAAGTTACTCTGAGAAATTCTGGTGACAATGATCTGGAGGAGCCTGTTAGCATCACTAGCCTTGAAACATTTTCACTAAGTTACAAGGTGCACTGGCCACTGTCTATAGTGTTATCACGTAAAGCCCTTACAAAGTACCAATTACTTTTTCGATTTCTTTTCCACTGCAAACATGTTGACCGTCAGTTATGTGGAGCATGGCAAGTACATCAAGGAGTCCGTGCTCTCAATACAAGTGGAACTGCTATCTCCAGATCATCTCTTCTTTGCCGGAGCATGCTTAAATTTATTAATAGCCTTTTGCACTATCTGACATTTGAGGTTATTGAACCCAATTGGCATCTGATGTATAACAGACTTCAGTCAGCAAATAGCATAGATGAAGTTATACAACATCATGATTTTTTCCTTGATAAGTGCTTGAGAGAGTGTTTACTTCTTTTACCTGAGCTGCTGAAGAAGGTGGAGAGGCTTAAATCCATGTGCCTACAATATGCAGCAGCAACTCAGTGGCTTATATCATCTTCTATTGAATTACATAACCCAGAGGAACCTATTGATGATTCAAAAGGCTTGAATAAAGCCAAATGGAAATCAGGCCAGGTCCTGAAGTCAACCACCAGAAATATGGCAGTCACTGATTCTGTTCTAAAATTTGAGAAAGAGTTTAATACTGAGCTTCAGAGTCTTGGATCAATCTTGAGTAATAATTCCCAGGCAGAGCCATATCTGTCTCATCTTGCACAATGGCTTCTTGGTGTCAAAAGTGAAAAGAATGGTTTATGA 1995 0.414 MNQTVVTNFEKPIGCYSPSVQELIVIDDVLSSMTGIEGRYILIKAVRGKNDDIAFLVDPSMDLALQELAKRIFPLCKSFLLISQFVESRSQFQSGLVNHAFSAALRALLLDYQAMVSQLEHQFRLGRLSLQGLWFYCQPMMRSMQALSTVIQKASVNNISGSAVLNLLQSQAKAMAGDNAVRMMLEKMTQCASSAYMSILERWVYEGIIDDPYGEFFIAEDKSLQKESLTQDYEAKYWRQRYSLKDGIPSFLENIAGTILTTGKYLNVMRECGHNVQVPPSENSKLMSFGSNHHYLECIKAAYNFASGELLNLIKEKYDLTGRLRSIKHYLLLDQGDFLVHFMDIARDELAKKPDEVSVEKLQSLLDLALRTTAAAADPFHEGLTCVVERCSLLRRLGTFNDLEVTLRNSGDNDLEEPVSITSLETFSLSYKVHWPLSIVLSRKALTKYQLLFRFLFHCKHVDRQLCGAWQVHQGVRALNTSGTAISRSSLLCRSMLKFINSLLHYLTFEVIEPNWHLMYNRLQSANSIDEVIQHHDFFLDKCLRECLLLLPELLKKVERLKSMCLQYAAATQWLISSSIELHNPEEPIDDSKGLNKAKWKSGQVLKSTTRNMAVTDSVLKFEKEFNTELQSLGSILSNNSQAEPYLSHLAQWLLGVKSEKNGL* 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0664 664 Pfam Gamma tubulin complex component C-terminal 320 651 IPR040457 GO:0043015
Gso16g0664 664 PANTHER GAMMA TUBULIN COMPLEX PROTEIN 12 655 IPR007259 GO:0000226|GO:0000922|GO:0005815|GO:0007020|GO:0043015
Gso16g0664 664 Pfam Gamma tubulin complex component N-terminal 26 317 IPR041470 -
Gso16g0664 664 Gene3D - 320 655 IPR042241 -
Gso16g0664 664 PANTHER GAMMA-TUBULIN COMPLEX COMPONENT 12 655 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0664 Gso-Chr16 9309047 9332944 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0664 K16569 - gmx:100795585 1278.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g0664 16 9309047 9332944 Gso3g0792 3 28540526 28550751 GST