Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0648 ATGGAGTTCAGTTTCGACGAGAAGGACTTCGCGTCGTGCTGCGGAAGCACCAAATTCGCGAAGGAAATGGCTTCGGCCTCTCCTTTCCGTTCGTTCCAGGACGCTGTTTCTGTCGCGAAGGGCGTTTGGTTCAACAGCGTTGATGTCAACGGTTGGCTTCAGGCCTTCTCCGCGCACCCTCAGATCGGTCAAACCCACGCTCCCTCTGTCGCCTCTGAAGCCAGTGCTCAGTGGAGTAAGGGAGAGCAATCAACTGCTTTAGCAACTGCTACTGGTTCTAGCTTACAGGAACTATCTGAATGGAATGCTCGATATAGGGAAAAGTTTGGGTTTGTATTTCTCATTTGTGCAGCTGGGAGAAGTACCGATGAGATACTTGCTGAACTGAAGAGACGTTATACAAACAGGCCAATTGTTGAATTTGAGATTGCTGCTCAGGAGCAAATGAAAATTACAGAACTGCGCCTTGCAAAGCTCTTTTCAAGTAGAGAAAACATTTCTTCTTCAGTTGATAAATATTCCGCTGCTAAAAAGGCAGAAGATCGTATAAGCATTATTGGTGGTCACGTGACTGCTGCTTCAGAGATTTCAACAGCAAAATTGATTCACCATCCTGCCAGAACCCGCCCTCCCATTACCACTCATGTGTTGGATGTTTCTCAGGGCTCTCCAGCTGCTGGTATCGAGGTACTTCTGGAGGTGTGGAGGGGCACTCAGTCTCGACCGACATTTGGGGCCTCAGGCGGTGGCAGTTGGGTGTTCCAAGGGTCTTCAACGACCGATTTAGATGGTCGTAGTGGTCAACTGTTGAGCATAGTTGATGATGTGAATCCAGGGATATACAGGATAAGTTTCAACACTGGGAAGTACATCCCAAATGGTTTCTTTCCTTATGTGTCTCTAGTGTTTGAAATCAAGGAGTCACAAAAAAGGGAACATTTCCATGTTCCTCTCCTGCTTTCACCATTCTCATTCAGCACTTACCGTGGAAGCTAG 996 0.4749 MEFSFDEKDFASCCGSTKFAKEMASASPFRSFQDAVSVAKGVWFNSVDVNGWLQAFSAHPQIGQTHAPSVASEASAQWSKGEQSTALATATGSSLQELSEWNARYREKFGFVFLICAAGRSTDEILAELKRRYTNRPIVEFEIAAQEQMKITELRLAKLFSSRENISSSVDKYSAAKKAEDRISIIGGHVTAASEISTAKLIHHPARTRPPITTHVLDVSQGSPAAGIEVLLEVWRGTQSRPTFGASGGGSWVFQGSSTTDLDGRSGQLLSIVDDVNPGIYRISFNTGKYIPNGFFPYVSLVFEIKESQKREHFHVPLLLSPFSFSTYRGS* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0648 331 Pfam HIUase/Transthyretin family 212 330 IPR023416 -
Gso16g0648 331 Gene3D Transthyretin/hydroxyisourate hydrolase domain 202 329 IPR036817 -
Gso16g0648 331 SUPERFAMILY UraD-Like 12 161 IPR036778 -
Gso16g0648 331 TIGRFAM hdxy_isourate: hydroxyisourate hydrolase 211 331 IPR014306 GO:0006144|GO:0033971
Gso16g0648 331 SUPERFAMILY Transthyretin (synonym: prealbumin) 204 331 IPR036817 -
Gso16g0648 331 ProSitePatterns Transthyretin signature 2. 314 326 IPR023419 -
Gso16g0648 331 PRINTS Transthyretin signature 211 231 IPR000895 -
Gso16g0648 331 PRINTS Transthyretin signature 309 331 IPR000895 -
Gso16g0648 331 PANTHER URICASE AND TRANSTHYRETIN-RELATED 1 331 IPR023416 -
Gso16g0648 331 CDD TLP_HIUase 210 331 IPR014306 GO:0006144|GO:0033971
Gso16g0648 331 ProSitePatterns Transthyretin signature 1. 215 230 IPR023418 -
Gso16g0648 331 Gene3D - 6 163 IPR036778 -
Gso16g0648 331 PANTHER 5-HYDROXYISOURATE HYDROLASE 1 331 - -
Gso16g0648 331 Pfam OHCU decarboxylase 10 157 IPR018020 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0648 Gso-Chr16 8603325 8609107 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0648 K13484 - gmx:100788368 654.825