Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0647 ATGGCAGCAGGAAAAGAAGAAAAGAAGAAAGAAGACATTGAAGTGATCACTGCCATTTACAAAGTTAACCTGCACTGCGAGGAATGTGGGAGCAAAATCAAGAAGCATCTCATGGTTACCCAAGGGGTACAGAGTGTGGAAATAGAGTTTGAGAAAGGAGAAATCAAGGCAAAAGGGAAAATAGACCCTTTGAATATCTTGAAGCTTATAGAGAAGAAGAGCAAGAAAAAAGTTGAATTAATATCACCAAAAGTGAAGCCTAAGGATATTACTACTACGGAACAAAAGACAAAGGAAATAAAAGATCCGATTATCCGCATCATCTCGGTGAAGGTTCACATGCATTGTGACAAATGTGAGGCTGACCTAAAAAGTAGATTAATAAAGCACAAAGGTATTTTCAATGTGAAAACTGACCAGAAGGCACAAACTGTAACAGTGGAAGGAACCATTGAAGTTGAGAAATTGATATCATTTTTTAGAAAAAAGGTGCATAAAAATGCTGAGATTACTTCCATAAAGGAAGTGAAAAAGGATCAAGAGAAGAAGGGCAAAGAGGAACTGAAGTCTTCAGAAACCACCAAAGAGAAGGATCACAGTAAGTCTGGTGAATCAACCAAGAAAAAAGATGATGATAATAATAAAAAATCAGGTGAATCAACCAAGGAAAAAGGAGACGGCAAATCTAGTGAAACAACCAAAATAATAGAGGTTCATCAAGGGCACCCAAAAGAGGAAATTAAGATAAAGGATAATAATGTTCCTTATATTATTCATTATGTCTACGCGCCACAACTTTTCAGCGATGAGAATCCAAATTCATGTTCTATTTTATAA 837 0.3608 MAAGKEEKKKEDIEVITAIYKVNLHCEECGSKIKKHLMVTQGVQSVEIEFEKGEIKAKGKIDPLNILKLIEKKSKKKVELISPKVKPKDITTTEQKTKEIKDPIIRIISVKVHMHCDKCEADLKSRLIKHKGIFNVKTDQKAQTVTVEGTIEVEKLISFFRKKVHKNAEITSIKEVKKDQEKKGKEELKSSETTKEKDHSKSGESTKKKDDDNNKKSGESTKEKGDGKSSETTKIIEVHQGHPKEEIKIKDNNVPYIIHYVYAPQLFSDENPNSCSIL* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0647 278 Gene3D - 106 179 - -
Gso16g0647 278 Gene3D - 15 88 - -
Gso16g0647 278 MobiDBLite consensus disorder prediction 177 244 - -
Gso16g0647 278 CDD HMA 24 71 IPR006121 GO:0046872
Gso16g0647 278 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 4 6 278 - -
Gso16g0647 278 SUPERFAMILY HMA, heavy metal-associated domain 106 161 IPR036163 GO:0046872
Gso16g0647 278 ProSiteProfiles Heavy-metal-associated domain profile. 16 79 IPR006121 GO:0046872
Gso16g0647 278 SUPERFAMILY HMA, heavy metal-associated domain 18 75 IPR036163 GO:0046872
Gso16g0647 278 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 7 6 278 IPR044577 GO:0046872
Gso16g0647 278 CDD HMA 113 154 IPR006121 GO:0046872
Gso16g0647 278 Pfam Heavy-metal-associated domain 110 166 IPR006121 GO:0046872
Gso16g0647 278 Pfam Heavy-metal-associated domain 21 76 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0647 Gso-Chr16 8588639 8593322 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0647 - - gmx:100783418 474.167