Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0495 ATGGACATCCTCTTCGCCCAGATCCAAGCCGACCTCCGCTCCAACGACGCCCTCCGCCAGTCCGGCGCCCTCCTCCAGGCCCTCCAGCAGTCCGCCGCCGGTCGCGACATCGCCGTCATTGCCAAGACTGCCGTCGAGGAAATCGTCGCCGCCCCCGCCTCCGCCGTCTGCAAGAAGCTCGCCTTCGACCTCATCCGCTCCACCCGCCTCACCCCCGACCTCTGGGAGACCGTCTGCGGCGGCATCCGCACCGACCTCCACTTCCCCGACCCCGACGTCGCCGCCGCCGCCGTCTCCATCCTCGCCGCCATCCCCTCCTACCGCCTCGCCAAACTCATCTCCGACTGCAACAAGGAAATCTCCGACTGCTTCGACTCCCCCAGCGACTCCCTCCGCTTCTCCGCCACTGAAACCCTTGGCTGCGTCCTCGCCCGCGACGACCTCGTCACCCTCTGCGAAAACAACGTCAACCTCCTCGACCGCGTCTCCGCCTGGTGGGCCCGCGTGGGGTCCAACATGCTCGACCGCTCCGACGCCGTTTCCAAGGTCGCATTCGAATCCGTCGGCCGCCTCTTCCAGGAATTCAGCTCCAAACGCATGAGCAAGCTCGCCGGCGACAAACTCGTCGATTCCGAAAACTCCCTCGCGATCCGCTCCAACTGGGTCTCTTCCATGGTGGACTTCGTCTGGAGGAAGCGCCGCGCCCTCATGGCGCGCTCCTTGATCCTCCCCGTTGAGAATTTCCGCACCACCGTGTTCCCCGTCGTGTACTCCGTCAAGGCCGTGGCCTCCGGTGGCGTCGAGGTCATTCGAAAACTCTCCAAGGCGGCTTCTTCCTCTGCATCATCCAATGCCGCGGGTGCTGAGGTTGATTCCCACGCGGAGAAGCTTGTTGGGGTTTCGGATGTGGTCACTCACCTGGCGCCGTTCCTTGTTTCGTCGTTGGAGCCAGCGTTGATCTATGAGGTTGGGATCAATATGCTGTATCTGGCTGATGTGCCTGGTGGGAAGCCTGAATGGGCCTCGCAATCGATCATTGCGATTCTGACGTTGTGGGATCGGCTGGACTTTGCTTCTGCTAGGGAGAGCATTGTTAGGGCGGTTGTCACCAATTTGCATCTCCTTGATCTTCACATGCAGGTATCACTGTTCAAGAGGTTACTTTTAATGGTTAAAAACCTGAGAGCAGAATCAGATCGAATGTATGCTCTAGCATGTATATGTAGAACGGCTCTTTGTGTACATCTATTCGCCAAGGAAAGTGTACGAAGAGGGCAGAAACCTCTTCCCGGAACGGATATAGCTTCCCTTTTTGAGGATGCCAGAGTGAATGATGATCTTAATAGCATTACAAGTAAAAGTATATTTAGGGAGGAGCTAGTTGCATCGCTGGTGGAAAGTTGCTTTCAGCTGTCTCTTCCATTGCCTGAACAAAATAACACGGGCATGGAGAGTAGGGTCATTGGAGCTTTGGCATATGGAACTGGTTATGGTGCATTAAACTGGACTGAACCTGCTTTGGAAGTAGTGGAAGTTTGTCGGCCTTGTGTTAAATGGGATTGCGACGGCCGCACCTACGCGGTTGACTGCTACTTGAAGTTGCTTGTTAGGCTATGTTACATATATGATACTCGGGGTGGGGTAAAAAGAGTCAAAGATGGAGCTTCTCAGGACCAAATTTTGAATGAAACTAGATTGCAAAACTTGCAACGTGAACTTGTGAAGGACTTGCATGAGGTTAATACACCAAGAATGTTGGCCCGCCTTATTTGGGCTATTGCAGAGCACATAGATATAGAAGGATTGGATCCACTCCTAGCAGACGACCCAGATGATCCTCTTAATGTCATTATATCAAATATTCACAAGGTTCTTTTCAATGTCGATTCAACTGCAGAAACAACAAATAGAGTTCAAGATGTACAGGCAGTTCTAATATCTGCTCAACGGCTGGGATCACGCCACCCTAGGGCTGGTCAGTTACTTACCAAAGAGCTTGAAGAGTTTAGGAACAATCCTTTGGCTGATTCTGTCAGCAAGCATCAATGTCGTTTGATATTGCAAAGAATCAAATATGCTACAAGTCATCAAGACAATAAGTGGGCAGGGGTAACAGAAGCTAGAGGGGATTACCCATTTAGCCACCACAAATTAACTGTTCAGTTTTATGAAGCATCTGCTGCTCAGGATAGAAAGTTGGAAGGATTGGTTCACAAGGCTATTCTAGAGTTATGGAGACCTGACCCCAGTGAACTAACCCTTTTACTCACAAAAGGAGTTGATTCTACTTTACTGAAGGTTCCTCCAAATGCAATTACTTTGACTGGAAGCAGTGATCCTTGCTATGTTGAAGGTTATCATTTGGCTGATGCAAGTGATGGGAGGATCACTCTGCATTTGAAGGTCTTAAACTTAACTGAGCTTGAATTAAATCGGGTGGATGTACGCGTGGGATTATCAGGTGCATTATATTATATGGATGGCTCTTCTCAAGCTGTGCGGCAATTGCGTGGTCTTGTTTCACAGGATCCAGTGTTGTGCAGTGTGACAGTTGGTGTTTCCCACTTTGAAAGATGTGCCCTTTGGGTTCAAGTATTGTATTACCCATTCTATGGTAGTAGTGCTGTCAGAGACTATGAAGGTGACTATGCCGAGGAGGATCCTCAAATCATGAGACAGAAGAGAAGCCTAAGGCCTGAATTAGGTGAACCTGTGATTTTGAGATGTCAGCCATATAAAATTCCATTGACTGAGCTTCTTTTGCCACACCAAATATCACCTGTTGAGTTTTTCCGACTGTGGCCCAGTTTGCCAGCTATTGTAGAATATACTGGCACATATACATATGAAGGAAGTGGCTTTAAGGCTACTGCAGCCCAGCAGTATGGTGCATCTCCTTTCTTAAGTGGACTGAAATCCTTGTCTTCCAAACCATTCCACAAAGTTTGTTCACATATTATCCGCACAGTGGCAGGGTTTGAGATGTGTTATGCTGCCAAAACTTGGCATGGTGGCTTCTTGGGCATGATGATTTTTGGTGCTAGTGAAGTGAGTAGAAATGTGGACTTAGGTGATGAGACTACAACCATGCTGTGCAAGTTTGTGGTTCGTGCATCCGATTCATCTATTACCAAGGAGATCGGATCAGACCTTCAGGGTTGGTTGGATGACCTTACTGATGGTGGAGCGGAATATATGCCTGAAGATGAAGTGAAGGTAGCTGCAGCCGAGAGGCTTCGCATATCAATGGAAAGGATAGCCTTGTTGAAGGCAGCCCAACCACGACCCAAGACTCCAAAATCTGATGACGAAGATGAAGAGGAGGAATATGACAATAATAAAGAAAAGAAAGATGGTGAAGAAGACGAGAAACCAAAGGGGCCATCAACTCTATCGAAACTAACTGCTGAGGAAGCTGAACATCAAGCTCTTCAAGCAGCAGTACTACAGGAGTGGCATATGATCTGCAAGGATCGAACTACTGAAGTTAATTAA 3495 0.4944 MDILFAQIQADLRSNDALRQSGALLQALQQSAAGRDIAVIAKTAVEEIVAAPASAVCKKLAFDLIRSTRLTPDLWETVCGGIRTDLHFPDPDVAAAAVSILAAIPSYRLAKLISDCNKEISDCFDSPSDSLRFSATETLGCVLARDDLVTLCENNVNLLDRVSAWWARVGSNMLDRSDAVSKVAFESVGRLFQEFSSKRMSKLAGDKLVDSENSLAIRSNWVSSMVDFVWRKRRALMARSLILPVENFRTTVFPVVYSVKAVASGGVEVIRKLSKAASSSASSNAAGAEVDSHAEKLVGVSDVVTHLAPFLVSSLEPALIYEVGINMLYLADVPGGKPEWASQSIIAILTLWDRLDFASARESIVRAVVTNLHLLDLHMQVSLFKRLLLMVKNLRAESDRMYALACICRTALCVHLFAKESVRRGQKPLPGTDIASLFEDARVNDDLNSITSKSIFREELVASLVESCFQLSLPLPEQNNTGMESRVIGALAYGTGYGALNWTEPALEVVEVCRPCVKWDCDGRTYAVDCYLKLLVRLCYIYDTRGGVKRVKDGASQDQILNETRLQNLQRELVKDLHEVNTPRMLARLIWAIAEHIDIEGLDPLLADDPDDPLNVIISNIHKVLFNVDSTAETTNRVQDVQAVLISAQRLGSRHPRAGQLLTKELEEFRNNPLADSVSKHQCRLILQRIKYATSHQDNKWAGVTEARGDYPFSHHKLTVQFYEASAAQDRKLEGLVHKAILELWRPDPSELTLLLTKGVDSTLLKVPPNAITLTGSSDPCYVEGYHLADASDGRITLHLKVLNLTELELNRVDVRVGLSGALYYMDGSSQAVRQLRGLVSQDPVLCSVTVGVSHFERCALWVQVLYYPFYGSSAVRDYEGDYAEEDPQIMRQKRSLRPELGEPVILRCQPYKIPLTELLLPHQISPVEFFRLWPSLPAIVEYTGTYTYEGSGFKATAAQQYGASPFLSGLKSLSSKPFHKVCSHIIRTVAGFEMCYAAKTWHGGFLGMMIFGASEVSRNVDLGDETTTMLCKFVVRASDSSITKEIGSDLQGWLDDLTDGGAEYMPEDEVKVAAAERLRISMERIALLKAAQPRPKTPKSDDEDEEEEYDNNKEKKDGEEDEKPKGPSTLSKLTAEEAEHQALQAAVLQEWHMICKDRTTEVN* 1165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0495 1164 MobiDBLite consensus disorder prediction 1112 1128 - -
Gso16g0495 1164 MobiDBLite consensus disorder prediction 1090 1138 - -
Gso16g0495 1164 Coils Coil 1103 1123 - -
Gso16g0495 1164 SUPERFAMILY ARM repeat 4 648 IPR016024 -
Gso16g0495 1164 Gene3D - 4 231 IPR011989 -
Gso16g0495 1164 PANTHER TSET COMPLEX MEMBER TSTA 1 1161 IPR037501 GO:0006897
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0495 Gso-Chr16 5874228 5883829 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0495 1 842 EF-hand Containing Proteins AT3G01780 85.036 0.0 1445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0495 - - gmx:100787122 2198.7