Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0476 ATGACACTCCGTCTAGTGTCAGCTCCGCCGTCGTTCTCTCTCTTCTCCTGCCGCGCCACCGCATCCACCGCCCTCCCTCCGCCGACACCGACGCCGACGCCGGCGCCGACGCTTATTTCTTCAATTCCACAGTCCCCGCCGCTAACATGCGCACTTCACTGTCCGCACTTCCAATCGTGTTCGGGGTGCACGCACGAGTTCAATCTCCACCGTCCGGTGATATTGGACGACGCCACCAATTTCTTTCGGAAACACGGCGTCTCCGACTTCACATTTGACACGTGCAAACTGTGGGGTTGGAGGTGCCGTGCGAAATTGGCCGTGCGTGGCTCTTCGACGGAGCCTCTCATTGGGCTCTATGAGGAGGGTACTCATAACGTAGTTGACATTCCACAATGCCAAGCTCATCATCCTAATATTAATGCTGCTGTGGAGCTGCTTAGACGGGGTATTATTGAAATAGGTGTTGAGCCATATATTGAAGATGAAGGTACTGGTGATTTGCGATATGTCCAGATGGCTGTGACAACATATAACACATCTCTTCCTGCGGCTCAAAGATATAAGAATGGAAAGGTTCAGGTTACATTGGTTTGGAATTCAAGAAATGAAAACTCACCCGGTTCAGACAAACTGAATGCATTAGCAAATTTTCTGTGGAAAAATGGTGGTCAAAGGAGCAGGCTTCATTTAATTCACTCTGTGTGGGCCAACTTTCAGACTTCTACTAACAATATAATTTTTGGGAATAAATGGAGACATCTTCTTGGAGAAAGAGATTTTTGGGAACACGTTGGTGGAATTGATGTATCCTTGGCACCTTCTAGTTTTGGCCAGGCAAACACACGGGCTTTTGATGCCTTGCTTCGGAGGTTACAGAAATATGTTCCATATGAATCAGATGTTGCTGATTTGTATGCTGGAGCTGGGGTCATTGGGTTGTCATTAGCTGCCACAAGAAAGTGCAGATCTATTAAATGCATCGAGATTAACAAAGAGTCAAAGGCATCTTTTGAGAAGACCATTGAACGGTTACCTGCCACCGTTGACAGCAGTATTACTTGGCATCATGCAGATGCTTCAAAAGAGCCCTTTTTGTGGCTTTTGGGTTCAGATGTTGTCGTCATTGATCCTCCCAGGAAAGGACTAGATGCATCTCTTATTGATGCATTGAAGAATATATCATCAGTCGAGCGTAAAGCCTTTTCATCTTCTGGAAGCTCAAACTCATCCCAGGAAGAGAAGAGACCTTGGGTTTTACGTGCTAAAGAAGATTCAGTCCAAATTGGAAGCAAACCTCCAACTAACATAGCTCAATCAGTGCCACAAACCCTTATTTATATAAGTTGCGGATGGGAAAGTTTTAAAGAGGACTGCAAGTCATTGTTGTCTAGTAAGGCATGGTATTTGGAAAAAGCTCATGGTTTTAATTTCTTTCCTGGCACCCAGAGCATTGAAGTTCTAGCAGTGTTCAAGAGGGGCCCTCAGAAAAAGAAACAAGGAAAGAAAAAGAAAAAACACTTGCAAGGAGCTGTGAGACATTAA 1545 0.4544 MTLRLVSAPPSFSLFSCRATASTALPPPTPTPTPAPTLISSIPQSPPLTCALHCPHFQSCSGCTHEFNLHRPVILDDATNFFRKHGVSDFTFDTCKLWGWRCRAKLAVRGSSTEPLIGLYEEGTHNVVDIPQCQAHHPNINAAVELLRRGIIEIGVEPYIEDEGTGDLRYVQMAVTTYNTSLPAAQRYKNGKVQVTLVWNSRNENSPGSDKLNALANFLWKNGGQRSRLHLIHSVWANFQTSTNNIIFGNKWRHLLGERDFWEHVGGIDVSLAPSSFGQANTRAFDALLRRLQKYVPYESDVADLYAGAGVIGLSLAATRKCRSIKCIEINKESKASFEKTIERLPATVDSSITWHHADASKEPFLWLLGSDVVVIDPPRKGLDASLIDALKNISSVERKAFSSSGSSNSSQEEKRPWVLRAKEDSVQIGSKPPTNIAQSVPQTLIYISCGWESFKEDCKSLLSSKAWYLEKAHGFNFFPGTQSIEVLAVFKRGPQKKKQGKKKKKHLQGAVRH* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0476 514 MobiDBLite consensus disorder prediction 495 514 - -
Gso16g0476 514 Gene3D - 101 278 - -
Gso16g0476 514 Gene3D Vaccinia Virus protein VP39 96 395 IPR029063 -
Gso16g0476 514 Gene3D Vaccinia Virus protein VP39 428 491 IPR029063 -
Gso16g0476 514 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 52 492 IPR029063 -
Gso16g0476 514 ProSiteProfiles SAM-dependent methyltransferase RNA m(5)U-type domain profile. 58 494 IPR010280 GO:0006396|GO:0008173
Gso16g0476 514 Pfam Methyltransferase small domain 287 385 IPR007848 GO:0008168
Gso16g0476 514 CDD AdoMet_MTases 301 397 - -
Gso16g0476 514 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 17 - -
Gso16g0476 514 PANTHER BNAA06G32370D PROTEIN 25 494 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0476 - - gmx:100816889 1006.13