Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0465 ATGCCTTCAATTCCAGAAGAGCCATTGTTGGCACCGAACCCGGACCGGTTCTGCATGTTCCCAATCCAATATCCTCAAATCTGGGAAATGTACAAGAAAGCCGAAGCCTCGTTCTGGACGGCGGAGGAGGTGGACCTCTCGCAGGACCTCCGCCACTGGGACTCCCTGACCGACGGCGAGCGCCACTTCGTCAGTCACGTCCTCGCCTTCTTCGCCGCCTCCGACGGCATCGTACTTGAGAACCTCGCTGGGCGCTTCACGAAGGAAATCCAAATCCCCGAGGCCCGCGCCTTCTACGGCTTCCAGATCGCCATCGAGAACATTCACTCCGAGATGTACAGCCTCCTCCTCGAAACCTACATCAAGGACTCCTCCCAGAAGAGCCACCTCTTCCGCGCCATCGACACCATCCCGTGCGTTACCAAGAAAGCCCAGTGGGCCCTACGCTGGATCGATTCCTCCGACTCCTTCGCCGAGCGTCTCGTTGCCTTCGCATGTGTGGAAGGTATCTTCTTCTCCGGAAGCTTCTGCGCTGTCTTCTGGCTCAAAAAACGTGGACTCATGCCCGGACTCACTTTCTCAAATGAACTAATATCACGCGATGAAGGTCTTCATTGTGATTTCGCTTGTCTTTTATACTCTCTGCTGAGACAGAAGCTCACCGAGGAGCGCGTAAGGGAGATTGTGAAGGACGCGGTGGACATTGAACGGGAGTTTGTGTGCGACGCGCTTCCCTGCGCGTTGGTGGGGATGAACGGTGATTTGATGAGCCAGTACATTGAATTTGTTGCGGATCGGTTGCTGGGTGCGCTAGGGTGCGGGAAGGTGTACAATGTTCAGAATCCGTTCGATTGGATGGAGCTGATTTCTCTGCAGGGGAAGACCAACTTCTTCGAGAAGCGCGTCGGGGAATATCAGAAGGCTTCTGTTATGTCCAGCTTGAACGGGAACGGTGGTGGGAGCCACGTGTTCAAGATGGATGAGGATTTCTAA 993 0.5488 MPSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWDSLTDGERHFVSHVLAFFAASDGIVLENLAGRFTKEIQIPEARAFYGFQIAIENIHSEMYSLLLETYIKDSSQKSHLFRAIDTIPCVTKKAQWALRWIDSSDSFAERLVAFACVEGIFFSGSFCAVFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRQKLTEERVREIVKDAVDIEREFVCDALPCALVGMNGDLMSQYIEFVADRLLGALGCGKVYNVQNPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGGSHVFKMDEDF* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0465 330 Gene3D Ribonucleotide Reductase, subunit A 3 307 IPR012348 GO:0016491
Gso16g0465 330 PANTHER RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN 6 330 - -
Gso16g0465 330 CDD RNRR2 17 291 IPR033909 GO:0009263
Gso16g0465 330 PANTHER RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN 6 330 IPR000358 GO:0009263
Gso16g0465 330 SUPERFAMILY Ferritin-like 4 307 IPR009078 -
Gso16g0465 330 Pfam Ribonucleotide reductase, small chain 16 282 IPR000358 GO:0009263
Gso16g0465 330 ProSitePatterns Ribonucleotide reductase small subunit signature. 105 121 IPR030475 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0465 Gso-Chr16 5472065 5473692 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0465 K10808 - gmx:100820622 675.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g0793 19 32400722 32402879 Gso16g0465 16 5472065 5473692 GST