Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0420 ATGGCTCAAGACATCCTCAGAATCATACCCACTCTCCTCTCTGCAGCTTCAATCGCCGTCATGGTCACCAACAACCAAACCGTTCTCATCTTCGCTATCCGCTTCCAAGCCCACTTTTATTACTCACCCTCCTTCAAGTTTTTTGTTGCAGCAAATGGTGTAGTCGTTGCCTTGTCTTTGCTGACACTGGTACTGAACTTTCTCATGAAACGTCAAGCATCACCAAGATACCATTTCTTCCTATTCTTGCATGACATTGTGATGATGGTGTTGTTGATAGCTGGATGTGCAGCGGCAACTGCAATAGGTTACGTGGGGCAGTTTGGAGAGGATCATGTGGGTTGGCAGCCAATATGCGACCATGTGCGCAAGTTCTGCACAACAAACTTGGTTTCCCTTTTGCTCTCTTATTTTGCTTTCATTTCCTATTTCGGAATCACTCTTTTATCAGCCTACAAAATCGTCTCTTCTTCTCCCAAGAACTAA 486 0.4486 MAQDILRIIPTLLSAASIAVMVTNNQTVLIFAIRFQAHFYYSPSFKFFVAANGVVVALSLLTLVLNFLMKRQASPRYHFFLFLHDIVMMVLLIAGCAAATAIGYVGQFGEDHVGWQPICDHVRKFCTTNLVSLLLSYFAFISYFGITLLSAYKIVSSSPKN* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0420 161 TIGRFAM A_tha_TIGR01569: plant integral membrane protein TIGR01569 5 153 IPR006459 -
Gso16g0420 161 PANTHER CASP-LIKE PROTEIN 1F1 1 155 - -
Gso16g0420 161 PANTHER NITRATE, FORMATE, IRON DEHYDROGENASE 1 155 - -
Gso16g0420 161 Pfam Casparian strip membrane protein domain 4 141 IPR006702 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0420 Gso-Chr16 4842595 4844366 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0420 - - gmx:100808345 313.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g0858 19 34659443 34661031 Gso16g0420 16 4842595 4844366 GST