Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0417 ATGGCGGATCCAATCGCGAAGGTTCTGATCGCGTTTGCGCTCTTAGCTTCCCTCTTGCTGTGTTCGCACGCTTCCTCCGACGTTCCCTTCATCGTTGCTCACAAGAAGGCCTCCCTCAACAGACTCAAGTCCGGCGCCGAAAGGGTCTCCGTCACCATCGACATCTTCAACCAAGGAACCTCGACGGCCTATGATGTAAGCTTATCAGACGATAGCTGGCCAAGTGATGCTTTTGATGTAATCAGCGGTAGCACTTCAAAGTCATGGGAAAGGCTTGATGCTGGTGGCATCCTTTCTCACACATTTGAGCTGGAGGCAAAATCAAAGGGAGTATTTGCCGGTGAACCAGCTGTCATAAAGTTCCGTGTTCCCACAAAGTCTGCTTTGCAGGAGGCATATTCAACTCCCATATTGCCTTTGGACGTTCTTTCTGATAGACCTCCTGAGAAGAAGTTTGAATGGGCTAAGAGGTTGCTGGCTAAGTATGGATCTCTAATCTCAGTGATCTCCATCATGGTCCTGTTCGTATACTTGGTAGCTTCACCATCAAAATCCAGTGCAAAGGGAAGCAAGAAGAAGCGTTAA 585 0.4872 MADPIAKVLIAFALLASLLLCSHASSDVPFIVAHKKASLNRLKSGAERVSVTIDIFNQGTSTAYDVSLSDDSWPSDAFDVISGSTSKSWERLDAGGILSHTFELEAKSKGVFAGEPAVIKFRVPTKSALQEAYSTPILPLDVLSDRPPEKKFEWAKRLLAKYGSLISVISIMVLFVYLVASPSKSSAKGSKKKR* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0417 194 Pfam Translocon-associated protein beta (TRAPB) 15 190 - -
Gso16g0417 194 PANTHER TRANSLOCON-ASSOCIATED PROTEIN SUBUNIT BETA-LIKE 8 193 - -
Gso16g0417 194 PIRSF TRAP-beta 5 194 IPR008856 GO:0005783|GO:0016021
Gso16g0417 194 PANTHER TRANSLOCON-ASSOCIATED PROTEIN, BETA SUBUNIT PRECURSOR TRAP-BETA SIGNAL SEQUENCE RECEPTOR BETA SUBUNIT 8 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0417 Gso-Chr16 4814782 4817494 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0417 K13250 - gmx:100500066 332.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g0861 19 34712433 34715331 Gso16g0417 16 4814782 4817494 GST