Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0403 ATGCAAACAGCCTTAACCTTCGCTGCCCCCAACGTTGTGCCATTGGCACCCACAAAGAGTGTCTCCCATATTACCATCTTTCCCACCAAATTGAAAGCCCCGCGCTCCTCACCTCGTTACTCTCCGATTAGGGTTGCAACCGTGGAGCCCGACACTTCAACTGTCGACTACAACTCTGCGTTCTCAGTGTTTCCTGCAGAAGCATGCGAAACTGTAGGAGGGGAAGCCTGCATGGCGGAGATGTACCCTGAAACGAAGCTACAGCCAGAGGCTAAGACTCCACGAGTCGTTACAGAGAACGTTGAGAGAGAGTATCTTGAATACGATGATCCTAAAACGGTATTTCGAGGAGAGGCTTGTGATGATCTTGGAGGAACTTTCTGTGAGACCGAGTATCAGAAGGGTGTCTACTAG 414 0.5048 MQTALTFAAPNVVPLAPTKSVSHITIFPTKLKAPRSSPRYSPIRVATVEPDTSTVDYNSAFSVFPAEACETVGGEACMAEMYPETKLQPEAKTPRVVTENVEREYLEYDDPKTVFRGEACDDLGGTFCETEYQKGVY* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0403 137 PANTHER LIGHT-REGULATED PROTEIN 1 137 - -
Gso16g0403 137 Pfam Light regulated protein Lir1 1 130 IPR009856 GO:0009507
Gso16g0403 137 PANTHER LIGHT-REGULATED PROTEIN 1, CHLOROPLASTIC 1 137 IPR009856 GO:0009507
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0403 Gso-Chr16 4645184 4647288 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0403 - - gmx:100305960 282.722
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g0883 19 35045511 35046810 Gso16g0403 16 4645184 4647288 GST