Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0402 ATGAGGCAGCACAAGCAAGTGTCCTCCATTAACCGGCGACCCACCGTTCTTTATCTGGTGTGCGTCGCAGCATTGTTTTCCCTCCTCCTCTTCTACACCCAATCCTCTTTCTTCTCAGGCGCCGTGTCTTCAGATTCTTCAAGGATAGATGCCGTCTCTTCAGATCGCGATTCCGAAACAATCCACGTTTTGTCTAACTTTCAGTCCAGTGTGAAGCAATGTGTGGATAACAGGGGGCTTGGACTCACTGCACATGTTATTGACCATTGCAAATTAATCCTTAAATACCCTGAAGGTACCAACAGCACTTGGTACAATGCACAGTTTAAGAAATTTGAGCCTTTGGAGTACAATTATGATTTGTGTGAGACAATCCTATTGTGGGAACAGTATCGCAACATGACTACGGTGTTGACCAGAGAGTATCTTGATGCTCGCCCTGGTGGTTGGGTGGATTATGCTCCACAAAGGATAGCGCAGTTGGGGGCAAAGAAGTGCACTAACAAGACACTTTGTGAAGAGAACCTCGATGTGTTATTACCTGCAAAGCCCCCATTTCATCCACGGCAGTTTCGAACTTGTGCTGTTGTTGGGAATTCTGGGGACCTTCTGAAGACTAGATTTGGGAAAGAAATTGATAGTCATGATGCTGTTTTTCGAGACAATGAGGCCCCTGTTAATGAGAAATATGCCAAATATGTTGGTCTTAAGAGGGATTTCCGTCTAGTTGTAAGAGGTGCTGCTCGTAACATGGTCCCCATTCTAAACGGGTCTGACAATGAGGTACTCATAATCAAAAGTCTGACACATAGAGAAATCAATGCAGTTATAAAGACTATACCCAATCCAGTCTATCTCTTCCAAGGAATTGTACTACGTCGAGGTGCCAAAGGAACTGGAATGAAATCTATTGAGTTAGCACTCTCCATGTGTGATATTATTGATATATATGGCTTCACTGTTGATCCAGGATACACTGAATGGACAAGATACTTCTCTCAGCCTAGGAAGGGACACAACCCACTTCAAGGAAGAGCATACTACCAACTCCTAGAATGTCTTGGGGTAATTAGAATTCACTCTCCCATGAGGTCTAAGAGGATGGAAGACTGGTCAGATATACCTAGTAGACAAATGATAAGCCAAGCACATGCAGCAGCTTTGCGCTTAAAAAGGAGTCAAGCTGGTCAGGGTGGTGACTTAGGGCAGTTTGGCAATTGTAAGGTGTGGGGCAATGTCAATCCAGACAAAAGTGGACCTGTCTCGGGATCACCAGACATGAGTGATGTCAGGAGATATTCAAATTATAGTAAATGGGAAGTCATGCCTTTTGAGAGTTTGAGGAAAGAAGCACGGGATCATTATAACCAGATGCAAGGGGTCTCTGTATATAAAATGGATGGCAATAAGTTGGATGATCTAGTCTGTGTGAGACATTCCTTAAAATCCGAGGTGTAA 1458 0.439 MRQHKQVSSINRRPTVLYLVCVAALFSLLLFYTQSSFFSGAVSSDSSRIDAVSSDRDSETIHVLSNFQSSVKQCVDNRGLGLTAHVIDHCKLILKYPEGTNSTWYNAQFKKFEPLEYNYDLCETILLWEQYRNMTTVLTREYLDARPGGWVDYAPQRIAQLGAKKCTNKTLCEENLDVLLPAKPPFHPRQFRTCAVVGNSGDLLKTRFGKEIDSHDAVFRDNEAPVNEKYAKYVGLKRDFRLVVRGAARNMVPILNGSDNEVLIIKSLTHREINAVIKTIPNPVYLFQGIVLRRGAKGTGMKSIELALSMCDIIDIYGFTVDPGYTEWTRYFSQPRKGHNPLQGRAYYQLLECLGVIRIHSPMRSKRMEDWSDIPSRQMISQAHAAALRLKRSQAGQGGDLGQFGNCKVWGNVNPDKSGPVSGSPDMSDVRRYSNYSKWEVMPFESLRKEARDHYNQMQGVSVYKMDGNKLDDLVCVRHSLKSEV* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0402 485 PANTHER SIALYLTRANSFERASE-LIKE PROTEIN 1 6 484 IPR044782 GO:0008373|GO:0009846|GO:0009860
Gso16g0402 485 Gene3D Glycosyl transferase family 29 152 285 IPR038578 -
Gso16g0402 485 Gene3D Glycosyl transferase family 29 287 362 IPR038578 -
Gso16g0402 485 Pfam Glycosyltransferase family 29 (sialyltransferase) 179 250 IPR001675 GO:0006486|GO:0008373
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0402 Gso-Chr16 4638396 4644034 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0402 77 356 Glycosyltransferase AT1G08660 86.429 0.0 527
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0402 - - gmx:100800355 980.319
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g0884 19 35048208 35062720 Gso16g0402 16 4638396 4644034 GST