Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0397 ATGCAGGAAGGAGACAATTGGTTGCATTTCATTCCATCAACATTTTCTGGCATAGATTCTTCCTACAGTTTACCTGACAACACTGCTCTTTTAACCCTCCAGGAATTTAAAAATGGAAAAGTACTCCTAAGATTGGCTCACCTTTATGAGATTGGAGAGGACAAAAATTACTCAGTAACGGCAAGTGTGGAATTGAAAAAATTGTTCCCTAACAAGAAGCAACAGAGATGA 231 0.381 MQEGDNWLHFIPSTFSGIDSSYSLPDNTALLTLQEFKNGKVLLRLAHLYEIGEDKNYSVTASVELKKLFPNKKQQR* 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0397 76 PANTHER ALPHA-MANNOSIDASE 2 73 - -
Gso16g0397 76 PANTHER ALPHA-MANNOSIDASE 2 73 - -
Gso16g0397 76 Pfam Glycosyl hydrolases family 38 C-terminal beta sandwich domain 28 69 IPR041147 -
Gso16g0397 76 Gene3D - 13 76 - -
Gso16g0397 76 SUPERFAMILY Galactose mutarotase-like 5 72 IPR011013 GO:0003824|GO:0005975|GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0397 Gso-Chr16 4512523 4513842 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0397 2 73 Glycoside Hydrolase AT3G26720 68.056 9.95e-28 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0397 K01191 - gmx:102659986 156.377