Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0376 ATGACGCTATCCACCGCGCCCTCACCGCCACCGGCATTAGAAGAGGAGCCGTTACCTCACGACGGCGACGATTACCACGGCATCGTTTCACTGGACGACGAGGGTTTCCCGTCGCAATTCCCCGAATCAGGAACGGCGTCGGAAAAGAGCAGTTTCGCCGCGGATTTCTATCGCAGCGGAACCGATTGGTCCTCGCTGTTGTTGTCGCTGGAAGATAGTAAACAGAGCGATTTAGCGCAAGATTCGGGGAAGAAGATGAAGCAGGCCAATCTGTTCCAGATTTGGGGGTTTAAAAGAAACGACGCCATTGGTTCAGTTGAATCTGGTCCCAGTAAAAGTGGTTGTTGTGACGACGGAGGTGGTTCTTCTGAGAGGAAGATTGTGAAACCTGAAAATCGGTGTTCGATTTTTCCCGACACAGGGAAAGAGTTCGAGAACGCGAAATCTTCTCGCAAGAGAAAGGGTTCCTGTGGTGAAAATAGGGTTACACGTTCCTGTCCCTTTTATAAGAAAATGCCAGGGACAATGTTCACTGTTGATGCTTTTCGTTATGGGTGTGTTGAAGGGTGCTCAGCATATTTTCTTACTCATTTCCATTGCGATCACTATGGTGGCCTTAGCAAGAAATGGTCACATGGCCCTATATATTGCTCTCCTCTCACAGGAAGGCTCGTTCAAATGTGTCTCTCGGTAAATCCTTTGTATATCCACCCTTTGGAATTTAATGAGGAACATGTGATTGATGGTGTCAAAGTGACTTTGTTAGAAGCTAATCACTGCCCTGGTGCAGCTTTGATTCACTTTAACCTACCAAATGGCCAACGCTATTTGCACACTGGAGATTTTAGAGCATGTAAACTAATGCAAGCTTACCATCTTCTTGTAAATCAACGTGTGAATGTACTTTATTTGGATACCACATATTGCAACCCAAAATACAGGTTCCCTTCCAAGGAAGAAGTACTCAATTATGTTGTCAAAATCACAAAGAACCACCTCAAAATTCATCCTAGAACTTTAGTGGTTGTTGGGGCATACAGTATTGGCAAAGAATGTGTATATCTTGCAATTTCTAAGGCTCTTGGGGTTAAAATTTATGCAAATGCTTCAAGAAGACGGATTTTGCAAGCTTTTGGTTGGCCTGACCTTTCAGATAAACTCTGTACAAACGGAAACAACACACTTCTCCATGTTCTGCCGATGTCATCTTTAAGAGTTGAGACCTTAAAGGATTACTTGAAGACCTACAAGGAGCAATTCACAGCAATTTTGGCATTTCGTCCTACAGGTTGGACTTTCAGTGAGAAGATAAGCAACGATCTGGAACTAATTAAACCTGTTTCTAAAGGAAATATTACGATATATGGGGTTCCCTATAGTGAGCACTCCAGCTTCTCAGAACTGCAAGATTTTGTTCAGGTTTTGAGGCCTGACAAGATAATTCCAACTGTGAATGTTGGAAATGCTGCTAATCGAGAAAAGATGCAATCCTACTTTCGAGATTGGTTGAAGGGCTAA 1518 0.4361 MTLSTAPSPPPALEEEPLPHDGDDYHGIVSLDDEGFPSQFPESGTASEKSSFAADFYRSGTDWSSLLLSLEDSKQSDLAQDSGKKMKQANLFQIWGFKRNDAIGSVESGPSKSGCCDDGGGSSERKIVKPENRCSIFPDTGKEFENAKSSRKRKGSCGENRVTRSCPFYKKMPGTMFTVDAFRYGCVEGCSAYFLTHFHCDHYGGLSKKWSHGPIYCSPLTGRLVQMCLSVNPLYIHPLEFNEEHVIDGVKVTLLEANHCPGAALIHFNLPNGQRYLHTGDFRACKLMQAYHLLVNQRVNVLYLDTTYCNPKYRFPSKEEVLNYVVKITKNHLKIHPRTLVVVGAYSIGKECVYLAISKALGVKIYANASRRRILQAFGWPDLSDKLCTNGNNTLLHVLPMSSLRVETLKDYLKTYKEQFTAILAFRPTGWTFSEKISNDLELIKPVSKGNITIYGVPYSEHSSFSELQDFVQVLRPDKIIPTVNVGNAANREKMQSYFRDWLKG* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0376 505 Gene3D - 173 484 IPR036866 -
Gso16g0376 505 PANTHER DNA CROSS-LINK REPAIR PROTEIN SNM1 69 504 - -
Gso16g0376 505 MobiDBLite consensus disorder prediction 1 47 - -
Gso16g0376 505 PANTHER DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED 69 504 - -
Gso16g0376 505 SUPERFAMILY Metallo-hydrolase/oxidoreductase 188 498 IPR036866 -
Gso16g0376 505 Gene3D - 314 462 - -
Gso16g0376 505 MobiDBLite consensus disorder prediction 16 30 - -
Gso16g0376 505 Pfam DNA repair metallo-beta-lactamase 382 488 IPR011084 -
Gso16g0376 505 CDD SNM1A-1C-like_MBL-fold 160 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0376 Gso-Chr16 4278745 4282972 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0376 K15340 - gmx:100790844 1014.22