Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0369 ATGGGCGCGAGCAGCGACCCCACCCAAGACGGTTCCGACGAGCAGCAGAAGCGTTCGGAGATCTACACCTACGAGGCCCCCTGGCACATCTACGCCATGAACTGGAGCGTCCGCCGCGACAAGAAGTATCGCCTCGCCATCGCCTCCCTCTTAGAGCAGTACCCTAACCGCGTGGAGATTGTCCAGCTCGACGACTCCAACGGCGAGATCCGTTCCGACCCCTCCCTCTCCTTCGAGCACCCTTACCCTCCCACCAAGGCCATCTTCATCCCCGACAAGGACTGCCACCGCCCCGATCTCCTCGCCACCTCCTCTGACTTCCTCCGCGTCTGGCACATCTCCGAATCCGCCGTCGAACTCAAGTCCCTCCTCAACGGCAACAAGAACAGCGAGTACTGTGGGCCCCTCACCTCCTTCGACTGGAACGAGGCCGAGCCCAGACGCATAGGCACCTCCAGCATCGATACCACCTGCACTATCTGGGATATCGAGAAGGAAACCGTCGATACTCAACTAATCGCTCATGATAAAGAGGTTTATGATATCGCATGGGGTGGCGTCGGAGTCTTCGCCTCCGTCTCCGCTGACGGTTCCGTTAGGGTTTTCGATCTCCGCGACAAGGAACACTCCACCATCATCTACGAGAGCTCGGAGCCGGACACGCCTCTGGTGCGGCTCGGGTGGAACAAGCAGGACCCACGCTACATGGCGACGATAATCATGGACAGTGCAAAGGTGGTGGTGTTGGATATTCGTTTTCCCACGCTCCCTGTGGTGGAGCTGCAGCGACACCAGGCGAGTGTGAACGCGATTGCGTGGGCCCCACATAGCTCGTGCCATATATGCACGGCCGGGGATGATTCGCAGGCGCTGATTTGGGACCTTTCTTCCATGGGTCAACCCGTGGAGGGTGGGCTTGACCCTATTCTTGCGTACACTGCCGGAGCGGAGATTGAGCAGCTTCAGTGGTCGTCTTCGCAGCCTGATTGGGTCGCTATTGCTTTCTCCACCAAGCTTCAGATTCTTAGGGTTTGA 1035 0.5865 MGASSDPTQDGSDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEIVQLDDSNGEIRSDPSLSFEHPYPPTKAIFIPDKDCHRPDLLATSSDFLRVWHISESAVELKSLLNGNKNSEYCGPLTSFDWNEAEPRRIGTSSIDTTCTIWDIEKETVDTQLIAHDKEVYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSMGQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0369 344 SUPERFAMILY WD40 repeat-like 47 302 IPR036322 GO:0005515
Gso16g0369 344 SMART WD40_4 165 203 IPR001680 GO:0005515
Gso16g0369 344 SMART WD40_4 117 162 IPR001680 GO:0005515
Gso16g0369 344 SMART WD40_4 71 112 IPR001680 GO:0005515
Gso16g0369 344 SMART WD40_4 254 294 IPR001680 GO:0005515
Gso16g0369 344 Gene3D - 13 343 IPR015943 GO:0005515
Gso16g0369 344 ProSiteProfiles Trp-Asp (WD) repeats profile. 261 297 IPR001680 GO:0005515
Gso16g0369 344 ProSitePatterns Trp-Asp (WD) repeats signature. 281 295 IPR019775 -
Gso16g0369 344 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 261 297 - -
Gso16g0369 344 Pfam WD domain, G-beta repeat 261 294 IPR001680 GO:0005515
Gso16g0369 344 Pfam WD domain, G-beta repeat 172 203 IPR001680 GO:0005515
Gso16g0369 344 PANTHER WD REPEAT CONTAINING PROTEIN 13 344 IPR045159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0369 Gso-Chr16 4199605 4201243 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0369 K11805 - gmx:100818850 706.057