Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0367 ATGATTCCTCTGTCCCATAACTCAGTCTCTGTTCACCTGGGTGGAGTACCCTGTGACCCTCTTCACCCAATTGCGTTCGATCCCACTCTGAACAAGCCTTGTTCTTCCACCTCTCTGTTTTGGAACTGCAAGAGGAGAAGGAAGAGGAAAAACTCCATTATCATGGCCTCTAATCTCAGGACCAACAATTTCCTGCGCCATGTGGAATCAATGAAGCTTCTTCCATCAGGTGCTGGCCACATTTCGCACCTGAACGCTGTGATACTTGGTGAATCTCTCGCCACTGAAGAGGATGATTTCGTTCTTCCAAGTGAGGACTTTGCTGGCCAAGCCAATGTTCAGTCCCCAGAACAGTATCTGAAGATGTATAAGAGATCGATTGAGGACCCTGCTGGATTCTGGTCTGAGATTGCCTCAGAGTTCTATTGGAAACAGAGATGGGGTGACAAAGTGTGTGATGAAAATTTTGATGTAAGGAAAGGGAATATAAAGATTGAGTGGTTCAAGGGTGGCATCACCAACATCTGTTATAATTGCTTGGATAGAAATGTTGAAGCTGGACTTGGTGACAAGGTCGCCGTTTACTGGGAAGGCAATGAGCCTGGTTTGGATGGTACTTTGACATACACTCAGCTTCTCCAGCAAGTTTGCCAGCTTGCAAACTACCTTAAAGATATTGGCGTGAAGAAGGGAGATGCTGTAATTATTTATTTGCCCATGCTTATGGAGCTTCCCATCGCAATGCTTGCCTGTGCCCGGATTGGTGCTGTTCATTCGGTTGTATTTGCTGGTTTTTCTGCAGAAGCTCTTTCCCAGAGAATCATTGATTGTAAACCAAAAGTTGTAATTACTTGCAATGCTGTTAAAAGGGGCTCTAAGCCTATCTATCTGAAAGATATTGTTGATGCTGCAATCAATGATTCATCCCAAAATGGGGTTTCTATAGATAAATGCCTAGTTTATGAAAACCCATTAGCAATGAAGAGGGTAGATACCAAATGGAAGGAAGGGCGTGATATATGGTGGCAGGATGTCATTCATCAATATCCAACTACTTGTCCAGTGGAGTGGGTTGATGCAGAGGATCCACTTTTTCTACTCTATACAAGTGGGAGTACAGGAAAACCAAAGGGTGTCCTCCATACAACTGGTGGTTACATGGTGTACACTGCAACAACATTCAAGTATGCATTTGACTACAAGCCGCATGACATCTACTGGTGTACTGCTGATTGTGGTTGGATTACTGGGCACAGCTATGTCACTTATGGACCCATGCTCAATGGTGCATCTGTCATCGTGTATGAAGGGGCTCCTAATTATCCTGATGCTGGGAGATGTTGGGACATTGTTGACAAATATAAGGTGACAATATTCTACACTGCTCCTACATTGGTGCGGTCCCTCATGCGTGATGGTGACACGTTTGTTACTCGCTACTCAAGGAAATCTTTACGAGTCCTAGGAAGTGTAGGCGAGCCCATAAATCCAAGTGCATGGAGGTGGTTTTACAATGTAGTTGGAGATTCAAGGTGCCCTATCTCTGACACTTGGTGGCAAACAGAAACGGGTGGCTTCATGATAACTCCACTACCAGGTGCTTGGCCCCAGAAACCTGGTTCTGCAACTCTCCCTTTCTTTGGAGTTCAGCCAGTCATTGTGGATGAGAAAGGTGTTGAAATAGAAGGAGAGTGCAATGGATATTTGTGTGTGAAGAAATCATGGCCCGGGGCATTCAGAACTCTGTATGGTGATCATGAAAGATATGAAACAACATATTTCAAGCCATTTTCCGGATACTATTTCAGTGGTGATGGTTGCAGCAGGGATAAAGATGGATACCATTGGCTCACTGGAAGAGTTGATGATGTTATCAATGTTAGTGGGCATCGAATTGGCACAGCAGAAGTGGAATCAGCTTTAGTTTCACATCCGCAATGTGCAGAGGCTGCTGTGGTTGGTGTGGAGCATGAGGTCAAAGGACAGGGCATCTATGCATTTGTTACAGTTGTGGATGGTGTTCCTTACAGTGAAGAACTGCGGAAGGACCTTGTACTCACAGTTCGAAAGCAGATAGGAGCCTTTGCAGCGCCTGACAAAATTCATTGGGCACCTGGCCTTCCAAAAACAAGGAGTGGAAAGATAATGCGAAGAATTCTGAGAAAAATTGCTTCCCGGCAGCTGGATGAACTTGGAGATACAAGTACCCTTTCAGATCCAAATGTGGTCAATCAACTTATAGAACTTGCAGATTCTTGA 2259 0.4471 MIPLSHNSVSVHLGGVPCDPLHPIAFDPTLNKPCSSTSLFWNCKRRRKRKNSIIMASNLRTNNFLRHVESMKLLPSGAGHISHLNAVILGESLATEEDDFVLPSEDFAGQANVQSPEQYLKMYKRSIEDPAGFWSEIASEFYWKQRWGDKVCDENFDVRKGNIKIEWFKGGITNICYNCLDRNVEAGLGDKVAVYWEGNEPGLDGTLTYTQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSAEALSQRIIDCKPKVVITCNAVKRGSKPIYLKDIVDAAINDSSQNGVSIDKCLVYENPLAMKRVDTKWKEGRDIWWQDVIHQYPTTCPVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVYTATTFKYAFDYKPHDIYWCTADCGWITGHSYVTYGPMLNGASVIVYEGAPNYPDAGRCWDIVDKYKVTIFYTAPTLVRSLMRDGDTFVTRYSRKSLRVLGSVGEPINPSAWRWFYNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATLPFFGVQPVIVDEKGVEIEGECNGYLCVKKSWPGAFRTLYGDHERYETTYFKPFSGYYFSGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTVVDGVPYSEELRKDLVLTVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQLDELGDTSTLSDPNVVNQLIELADS* 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0367 752 ProSitePatterns Putative AMP-binding domain signature. 366 377 IPR020845 -
Gso16g0367 752 Gene3D - 101 622 IPR042099 -
Gso16g0367 752 Gene3D - 623 752 IPR045851 -
Gso16g0367 752 PANTHER ACETYL-COENZYME A SYNTHETASE 72 752 - -
Gso16g0367 752 Pfam AMP-binding enzyme C-terminal domain 636 714 IPR025110 -
Gso16g0367 752 Pfam AMP-binding enzyme 188 627 IPR000873 -
Gso16g0367 752 CDD ACS 117 739 - -
Gso16g0367 752 PANTHER ACETYL-COENZYME A SYNTHETASE 72 752 - -
Gso16g0367 752 Hamap Acetyl-coenzyme A synthetase [acs]. 96 750 IPR011904 GO:0003987|GO:0016208|GO:0019427
Gso16g0367 752 Pfam Acetyl-coenzyme A synthetase N-terminus 119 179 IPR032387 -
Gso16g0367 752 SUPERFAMILY Acetyl-CoA synthetase-like 106 747 - -
Gso16g0367 752 TIGRFAM Ac_CoA_lig_AcsA: acetate--CoA ligase 114 748 IPR011904 GO:0003987|GO:0016208|GO:0019427
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0367 Gso-Chr16 4178697 4187284 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0367 61 751 Acyl Lipid Metabolism Gene Families AT5G36880 83.936 0.0 1243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0367 K01895 - gmx:100789257 1568.52