Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0333 ATGGCAACTCTGAGCAATTCAACTAATATCTTTTGGCAAGATTGTCAAGTAGGAAGGCTTGAAAGGCAGAAGCTACTTAACCAAAAGGGATGTGTTGTATGGATTACTGGACTCAGCGGATCAGGAAAAAGCACATTGGCATGTTCCCTAAGCAGAGAACTGCACTCAAAGGGAAAGTTATCTTATGTCCTTGATGGAGATAACCTTCGACATGGACTAAACAAGGATCTTGGTTTCAAAGCCGAAGATCGCGCTGAAAATATTCGCAGAACTGGAGAAGTGGCAAAACTGTTTGCTGATGCTGGCTTAATATGTGTTGCTAGTCTGATATCTCCTTACAGAAGAGACCGAGACACTTGCCGTGCCATGTTACCTGATGCAAATTTTATTGAGGTTTTCATGAACATGCCTCTAGAATTGTGTGAGGCACGAGATCCAAAAGGCCTCTATAAGCTTGCTCGTGCGGGGAAAATCAAAGGTTTTACCGGCATTGATGATCCTTATGAACCACCCATAAACTGTGAGATTGAAATAAAGCAGGAAAATGGGGATTGTCCAACACCCACTTTGATGGCTGGACAAGTAGTTACTTACTTGGAGAATAAAGGATTTCTTGAATCCTAG 624 0.4231 MATLSNSTNIFWQDCQVGRLERQKLLNQKGCVVWITGLSGSGKSTLACSLSRELHSKGKLSYVLDGDNLRHGLNKDLGFKAEDRAENIRRTGEVAKLFADAGLICVASLISPYRRDRDTCRAMLPDANFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPINCEIEIKQENGDCPTPTLMAGQVVTYLENKGFLES* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0333 207 PANTHER ADENYLYL-SULFATE KINASE 1, CHLOROPLASTIC 1 206 - -
Gso16g0333 207 PANTHER BIFUNCTIONAL 3'-PHOSPHOADENOSINE 5'-PHOSPHOSULFATE SYNTHASE 1 206 - -
Gso16g0333 207 TIGRFAM apsK: adenylyl-sulfate kinase 14 182 IPR002891 GO:0000103|GO:0004020|GO:0005524
Gso16g0333 207 Gene3D - 2 206 IPR027417 -
Gso16g0333 207 CDD APSK 32 179 IPR002891 GO:0000103|GO:0004020|GO:0005524
Gso16g0333 207 Pfam Adenylylsulphate kinase 29 182 - -
Gso16g0333 207 Hamap Adenylyl-sulfate kinase [cysC]. 28 203 IPR002891 GO:0000103|GO:0004020|GO:0005524
Gso16g0333 207 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 28 202 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0333 Gso-Chr16 3787365 3791209 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0333 K00860 - gmx:100794000 425.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g0951 19 36615312 36620996 Gso16g0333 16 3787365 3791209 GST