Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0305 ATGGAAGGTCGACAGATTCTTTCCAGATTCTGTCCAAAATCATCTTCAGTGTCATCTATTCCAATTGTGAAGCAGCAATACTCTCTAAAGTTCCCTCTTTTACCTTCTTCATCGTCGCATCTTTCTAGTCAATCTCAGAATCTCGATGTTCCTAGCAGAGCTGTCCATCCTATCAGCATTGTGCACAAAGAAGTGTGTTCTAGTTCTTGGAGGAGGATATGGTGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTGCTGCAGAACCAAAGGAGGGCCATGAGGTAACGGCTCAGGTCACGGTGGGAAGGAAAAAGCTAGCAGTTTTCGTGTCTGGTGGAGGATCCAACTTCAGAGCCATTCACGAGGCCTCCAAAAGGGGATCACTTCATGGAGATGTTCTTGTGTTGGTCACAAATAAAAGTGATTGTGGAGGTGCGGGGTATGCAAGAAATAACGGTATCCCAGTTATATTGTACCCTAAAGCAAAGGATGAATCCAATCCAAGTGACCTTGTTGAGACACTAAGGAAATTCAAGGTTGATTTTATTCTTTTAGCTGGATACCTCAAACTTATACCAGTGGAATTGATCCGAGCTTACGAAAGATCTATATTCAACATTCATCCATCACTTCTTCCAGCTTTTGGAGGCAAGGGCTTTTATGGCATGAAAGTGCATAAAGCAGTAATTGCTTCTGGAGCAAGGTTTTCAGGTCCTACGATTCATTTTGTTGATGAACACTATGATACAGGGCGTATCCTTGCACAGCGTGTTGTCCCTGTGCTTGCCAATGATACTGCTGAAGAGTTGGCTGCAAGGGTTCTCAAAGAGGAGCACCAATTATATGTGGAGGTGGTGGAGGCTTTATGTGAAGAGCGTGTGGTTTGGAGGAAAGATGGTGTTCCTCTCATACAAAGCAAAGAAAACCCCAATGAGTTTCGCTGA 951 0.4353 MEGRQILSRFCPKSSSVSSIPIVKQQYSLKFPLLPSSSSHLSSQSQNLDVPSRAVHPISIVHKEVCSSSWRRIWCSSSSSSSSSSSSAAEPKEGHEVTAQVTVGRKKLAVFVSGGGSNFRAIHEASKRGSLHGDVLVLVTNKSDCGGAGYARNNGIPVILYPKAKDESNPSDLVETLRKFKVDFILLAGYLKLIPVELIRAYERSIFNIHPSLLPAFGGKGFYGMKVHKAVIASGARFSGPTIHFVDEHYDTGRILAQRVVPVLANDTAEELAARVLKEEHQLYVEVVEALCEERVVWRKDGVPLIQSKENPNEFR* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0305 316 Gene3D - 85 314 - -
Gso16g0305 316 SUPERFAMILY Formyltransferase 106 305 IPR036477 GO:0009058
Gso16g0305 316 TIGRFAM PurN: phosphoribosylglycinamide formyltransferase 106 296 IPR004607 GO:0004644|GO:0006189
Gso16g0305 316 MobiDBLite consensus disorder prediction 79 99 - -
Gso16g0305 316 PIRSF FormyFH4_hydr 1 308 - -
Gso16g0305 316 CDD FMT_core_GART 107 291 IPR004607 GO:0004644|GO:0006189
Gso16g0305 316 Hamap Phosphoribosylglycinamide formyltransferase [purN]. 107 294 IPR004607 GO:0004644|GO:0006189
Gso16g0305 316 ProSitePatterns Phosphoribosylglycinamide formyltransferase active site. 240 263 IPR001555 -
Gso16g0305 316 PANTHER PHOSPHORIBOSYLGLYCINAMIDE FORMYLTRANSFERASE 71 309 - -
Gso16g0305 316 Pfam Formyl transferase 106 288 IPR002376 GO:0009058
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0305 Gso-Chr16 3479454 3482105 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0305 K00601 - gmx:100784486 565.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g0980 19 37094731 37098529 Gso16g0305 16 3479454 3482105 GST